RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 TRERF1Q96PN7 1200 aa21.14■□□□□ 0.97
POLR2J3-209ENST00000504157 C3P01024 1663 aa21.14■□□□□ 0.97
POLR2J3-209ENST00000504157 NYAP1Q6ZVC0 841 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 CERS3Q8IU89 383 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 DRC7Q8IY82 874 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 ERBB3P21860 1342 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 ZNF592Q92610 1267 aa21.13■□□□□ 0.97
POLR2J3-209ENST00000504157 GNAI3P08754 354 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 H2AFXP16104 143 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 TPRNQ4KMQ1 711 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 LUZP1Q86V48 1076 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 SMC3Q9UQE7 1217 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 SNX14Q9Y5W7 946 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 SPATA31D1Q6ZQQ2 1576 aa21.12■□□□□ 0.97
POLR2J3-209ENST00000504157 TYRO3Q06418 890 aa21.11■□□□□ 0.97
POLR2J3-209ENST00000504157 NME9Q86XW9 330 aa21.11■□□□□ 0.97
POLR2J3-209ENST00000504157 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
POLR2J3-209ENST00000504157 FHOD1Q9Y613 1164 aa21.11■□□□□ 0.97
POLR2J3-209ENST00000504157 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-209ENST00000504157 SLU7O95391 586 aaKnown RBP21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 RUFY3Q7L099 469 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 COG3Q96JB2 828 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 MON2Q7Z3U7 1717 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 SGSM2O43147 1006 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 AK2P54819 239 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 MAP3K11Q16584 847 aa21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 GEMIN8Q9NWZ8 242 aaKnown RBP21.1■□□□□ 0.97
POLR2J3-209ENST00000504157 CDC25BP30305 580 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 TRIM5Q9C035 493 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 CBX8Q9HC52 389 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 MTMR6Q9Y217 621 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 NEMFO60524 1076 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 TDRD7Q8NHU6 1098 aaKnown RBP21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 IL25Q9H293 177 aa21.09■□□□□ 0.97
POLR2J3-209ENST00000504157 TNRQ92752 1358 aa21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 HTATSF1O43719 755 aaKnown RBP21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 TNNT3P45378 269 aaPredicted RBP21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 TXLNBQ8N3L3 684 aa21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 RASSF4Q9H2L5 321 aa21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 ELP1O95163 1332 aa21.08■□□□□ 0.97
POLR2J3-209ENST00000504157 NOP2P46087 812 aaKnown RBP21.08■□□□□ 0.96
POLR2J3-209ENST00000504157 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.96
POLR2J3-209ENST00000504157 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 G2E3Q7L622 706 aa21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 CLIP2Q9UDT6 1046 aa21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 RSPH14Q9UHP6 348 aa21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 CPS1P31327 1500 aa21.07■□□□□ 0.96
POLR2J3-209ENST00000504157 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 KDM4FA0A1W2PPD8 638 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 TEX35Q5T0J7 233 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 ZSCAN31Q96LW9 406 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 SH2B1Q9NRF2 756 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 F6X3S4 739 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 DNM1Q05193 864 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 MCM10Q7L590 875 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 LRRC8AQ8IWT6 810 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 GTF3C6Q969F1 213 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 NUP62CLQ9H1M0 184 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 KCND1Q9NSA2 647 aa21.06■□□□□ 0.96
POLR2J3-209ENST00000504157 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 USP27XA6NNY8 438 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 PLA2G4AP47712 749 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 RRS1Q15050 365 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 CCDC144BQ3MJ40 725 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 CCDC144CPQ8IYA2 1237 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 PXDNLA1KZ92 1463 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 RGPD1P0DJD0 1748 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 CRYBG1Q9Y4K1 1723 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 PNMA6AP0CW24 399 aaPredicted RBP21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 CTR9Q6PD62 1173 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 STAG3Q9UJ98 1225 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 ITSN1Q15811 1721 aa21.05■□□□□ 0.96
POLR2J3-209ENST00000504157 KIF2AO00139 706 aaPredicted RBP21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 RAB11FIP3O75154 756 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 EIF4A2Q14240 407 aaKnown RBP21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 ANO6Q4KMQ2 910 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 RBM43Q6ZSC3 357 aaKnown RBP21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 GJB2P29033 226 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
POLR2J3-209ENST00000504157 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
POLR2J3-209ENST00000504157 L2HGDHQ9H9P8 463 aa21.03■□□□□ 0.96
POLR2J3-209ENST00000504157 MMP14P50281 582 aa21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 CLCN6P51797 869 aa21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 RASEFQ8IZ41 740 aa21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 PI4K2BQ8TCG2 481 aa21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 SECISBP2LQ93073 1101 aaKnown RBP21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 TPM4P67936 248 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms