RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 ABHD8Q96I13 439 aa11.84□□□□□ -0.51
NR1I3-219ENST00000504010 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
NR1I3-219ENST00000504010 CCDC88AQ3V6T2 1871 aa11.84□□□□□ -0.51
NR1I3-219ENST00000504010 DLEC1Q9Y238 1755 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 POTECB2RU33 542 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
NR1I3-219ENST00000504010 RGS19P49795 217 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 FKBP8Q14318 412 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
NR1I3-219ENST00000504010 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
NR1I3-219ENST00000504010 TM4SF1P30408 202 aa11.82□□□□□ -0.52
NR1I3-219ENST00000504010 WWC1Q8IX03 1113 aa11.82□□□□□ -0.52
NR1I3-219ENST00000504010 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
NR1I3-219ENST00000504010 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-219ENST00000504010 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
NR1I3-219ENST00000504010 PDE4DIPQ5VU43 2346 aa11.82□□□□□ -0.52
NR1I3-219ENST00000504010 DICER1Q9UPY3 1922 aaKnown RBP11.82□□□□□ -0.52
NR1I3-219ENST00000504010 CEMIPQ8WUJ3 1361 aa11.81□□□□□ -0.52
NR1I3-219ENST00000504010 BTBD11A6QL63 1104 aa11.81□□□□□ -0.52
NR1I3-219ENST00000504010 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
NR1I3-219ENST00000504010 LMOD3Q0VAK6 560 aa11.81□□□□□ -0.52
NR1I3-219ENST00000504010 KRT24Q2M2I5 525 aa11.81□□□□□ -0.52
NR1I3-219ENST00000504010 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
NR1I3-219ENST00000504010 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
NR1I3-219ENST00000504010 LBX1P52954 281 aa11.8□□□□□ -0.52
NR1I3-219ENST00000504010 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-219ENST00000504010 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
NR1I3-219ENST00000504010 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
NR1I3-219ENST00000504010 MRC1P22897 1456 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 IQCA1LA6NCM1 817 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 ZPR1O75312 459 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
NR1I3-219ENST00000504010 VEGFBP49765 207 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 MAP2K1Q02750 393 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-219ENST00000504010 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
NR1I3-219ENST00000504010 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
NR1I3-219ENST00000504010 SIPA1L3O60292 1781 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-219ENST00000504010 H0YIN7 160 aa11.78□□□□□ -0.52
NR1I3-219ENST00000504010 NFKBIEO00221 500 aa11.78□□□□□ -0.52
NR1I3-219ENST00000504010 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-219ENST00000504010 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
NR1I3-219ENST00000504010 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-219ENST00000504010 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
NR1I3-219ENST00000504010 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
NR1I3-219ENST00000504010 SCN4AP35499 1836 aa11.77□□□□□ -0.52
NR1I3-219ENST00000504010 HSPA8P11142 646 aaKnown RBP11.77□□□□□ -0.53
NR1I3-219ENST00000504010 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-219ENST00000504010 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
NR1I3-219ENST00000504010 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
NR1I3-219ENST00000504010 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
NR1I3-219ENST00000504010 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
NR1I3-219ENST00000504010 LTBP3Q9NS15 1303 aa11.77□□□□□ -0.53
NR1I3-219ENST00000504010 CCDC27Q2M243 656 aa11.76□□□□□ -0.53
NR1I3-219ENST00000504010 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
NR1I3-219ENST00000504010 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
NR1I3-219ENST00000504010 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
NR1I3-219ENST00000504010 CHL1O00533 1208 aa11.75□□□□□ -0.53
NR1I3-219ENST00000504010 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
NR1I3-219ENST00000504010 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
NR1I3-219ENST00000504010 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
NR1I3-219ENST00000504010 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-219ENST00000504010 ZNF521Q96K83 1311 aa11.75□□□□□ -0.53
NR1I3-219ENST00000504010 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 GNAI1P63096 354 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 NFIXQ14938 502 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
NR1I3-219ENST00000504010 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 TJP1Q07157 1748 aa11.74□□□□□ -0.53
NR1I3-219ENST00000504010 ITGBL1O95965 494 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-219ENST00000504010 SERPINB2P05120 415 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
NR1I3-219ENST00000504010 SOS1Q07889 1333 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-219ENST00000504010 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 SOGA3Q5TF21 947 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 WDR63Q8IWG1 891 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
NR1I3-219ENST00000504010 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
NR1I3-219ENST00000504010 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
NR1I3-219ENST00000504010 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-219ENST00000504010 PDE6BP35913 854 aa11.72□□□□□ -0.53
NR1I3-219ENST00000504010 CALD1Q05682 793 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms