RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 CDC42BPGQ6DT37 1551 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 LRPPRCP42704 1394 aaKnown RBP10□□□□□ -0.81
PTCD2-206ENST00000503315 RAB3GAP2Q9H2M9 1393 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 PTPREP23469 700 aa9.99□□□□□ -0.81
PTCD2-206ENST00000503315 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
PTCD2-206ENST00000503315 AFF2P51816 1311 aa9.99□□□□□ -0.81
PTCD2-206ENST00000503315 ATP1A2P50993 1020 aa9.99□□□□□ -0.81
PTCD2-206ENST00000503315 FBXO33Q7Z6M2 555 aa9.99□□□□□ -0.81
PTCD2-206ENST00000503315 TRIM50Q86XT4 487 aa9.99□□□□□ -0.81
PTCD2-206ENST00000503315 NRXN1Q9ULB1 1477 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 FMN2Q9NZ56 1722 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
PTCD2-206ENST00000503315 NUDT7P0C024 238 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 RXRBP28702 533 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 DPYDQ12882 1025 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 EML3Q32P44 896 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 ESCO1Q5FWF5 840 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 ASB16Q96NS5 453 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 DCTN4Q9UJW0 460 aa9.98□□□□□ -0.81
PTCD2-206ENST00000503315 COL22A1Q8NFW1 1626 aaPredicted RBP9.98□□□□□ -0.81
PTCD2-206ENST00000503315 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
PTCD2-206ENST00000503315 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 MYOM2P54296 1465 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 SMAPO00193 183 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
PTCD2-206ENST00000503315 MCCD1P59942 119 aaPredicted RBP9.97□□□□□ -0.81
PTCD2-206ENST00000503315 EAPPQ56P03 285 aaPredicted RBP9.97□□□□□ -0.81
PTCD2-206ENST00000503315 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
PTCD2-206ENST00000503315 CDK12Q9NYV4 1490 aaPredicted RBP9.96□□□□□ -0.81
PTCD2-206ENST00000503315 NPHP3Q7Z494 1330 aa9.96□□□□□ -0.81
PTCD2-206ENST00000503315 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.81
PTCD2-206ENST00000503315 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
PTCD2-206ENST00000503315 C3orf80F5H4A9 247 aa9.96□□□□□ -0.82
PTCD2-206ENST00000503315 FOXO3O43524 673 aa9.96□□□□□ -0.82
PTCD2-206ENST00000503315 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
PTCD2-206ENST00000503315 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
PTCD2-206ENST00000503315 QTRT2Q9H974 415 aaKnown RBP9.96□□□□□ -0.82
PTCD2-206ENST00000503315 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
PTCD2-206ENST00000503315 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.82
PTCD2-206ENST00000503315 PXDNQ92626 1479 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 ICMTO60725 284 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 SLC10A3P09131 477 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 PLPP7Q8NBV4 271 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
PTCD2-206ENST00000503315 DHX57Q6P158 1386 aaKnown RBP9.95□□□□□ -0.82
PTCD2-206ENST00000503315 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
PTCD2-206ENST00000503315 FUT2Q10981 343 aa9.94□□□□□ -0.82
PTCD2-206ENST00000503315 ZNF211Q13398 564 aaPredicted RBP9.94□□□□□ -0.82
PTCD2-206ENST00000503315 ZNF594Q96JF6 807 aaPredicted RBP9.94□□□□□ -0.82
PTCD2-206ENST00000503315 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
PTCD2-206ENST00000503315 KIF1AQ12756 1690 aa9.94□□□□□ -0.82
PTCD2-206ENST00000503315 PRMT3O60678 531 aa9.93□□□□□ -0.82
PTCD2-206ENST00000503315 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
PTCD2-206ENST00000503315 RBM6P78332 1123 aaKnown RBP9.93□□□□□ -0.82
PTCD2-206ENST00000503315 MAP7D1Q3KQU3 841 aa9.93□□□□□ -0.82
PTCD2-206ENST00000503315 SYMPKQ92797 1274 aaKnown RBP9.93□□□□□ -0.82
PTCD2-206ENST00000503315 C21orf2O43822 256 aa9.92□□□□□ -0.82
PTCD2-206ENST00000503315 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
PTCD2-206ENST00000503315 USP21Q9UK80 565 aa9.92□□□□□ -0.82
PTCD2-206ENST00000503315 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
PTCD2-206ENST00000503315 DLC1Q96QB1 1528 aa9.92□□□□□ -0.82
PTCD2-206ENST00000503315 ADGRB1O14514 1584 aa9.92□□□□□ -0.82
PTCD2-206ENST00000503315 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 SCNN1AP37088 669 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 TAGLNQ01995 201 aaKnown RBP9.91□□□□□ -0.82
PTCD2-206ENST00000503315 SWT1Q5T5J6 900 aaKnown RBP9.91□□□□□ -0.82
PTCD2-206ENST00000503315 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 CXXC1Q9P0U4 656 aaPredicted RBP9.91□□□□□ -0.82
PTCD2-206ENST00000503315 CEP126Q9P2H0 1117 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 SPATA31A3Q5VYP0 1347 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 USP32Q8NFA0 1604 aa9.91□□□□□ -0.82
PTCD2-206ENST00000503315 SAFB2Q14151 953 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTCD2-206ENST00000503315 Q3C1V9 767 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 KRT28Q7Z3Y7 464 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 DCAF11Q8TEB1 546 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 BCL9LQ86UU0 1499 aa9.9□□□□□ -0.82
PTCD2-206ENST00000503315 FGD1P98174 961 aa9.9□□□□□ -0.83
PTCD2-206ENST00000503315 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.83
PTCD2-206ENST00000503315 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.83
PTCD2-206ENST00000503315 BACH2Q9BYV9 841 aa9.9□□□□□ -0.83
PTCD2-206ENST00000503315 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.83
PTCD2-206ENST00000503315 TRPC5Q9UL62 973 aaPredicted RBP9.9□□□□□ -0.83
PTCD2-206ENST00000503315 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.83
PTCD2-206ENST00000503315 EP400Q96L91 3159 aa9.9□□□□□ -0.83
PTCD2-206ENST00000503315 RGS12O14924 1447 aa9.89□□□□□ -0.83
PTCD2-206ENST00000503315 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.89□□□□□ -0.83
PTCD2-206ENST00000503315 ADGRB2O60241 1585 aa9.89□□□□□ -0.83
PTCD2-206ENST00000503315 EMP3P54852 163 aa9.89□□□□□ -0.83
PTCD2-206ENST00000503315 SEC13P55735 322 aa9.89□□□□□ -0.83
PTCD2-206ENST00000503315 DOK7Q18PE1 504 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms