RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
USP46-204ENST00000503060 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
USP46-204ENST00000503060 PARP4Q9UKK3 1724 aaKnown RBP14.22□□□□□ -0.13
USP46-204ENST00000503060 DDX58O95786 925 aaKnown RBP14.21□□□□□ -0.13
USP46-204ENST00000503060 NHSL1Q5SYE7 1610 aa14.21□□□□□ -0.13
USP46-204ENST00000503060 TTC5Q8N0Z6 440 aa14.21□□□□□ -0.14
USP46-204ENST00000503060 SLKQ9H2G2 1235 aaPredicted RBP14.21□□□□□ -0.14
USP46-204ENST00000503060 ANTXR1Q9H6X2 564 aa14.21□□□□□ -0.14
USP46-204ENST00000503060 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 RAB11FIP3O75154 756 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 CABP4P57796 275 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 KIF2CQ99661 725 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 MX1P20591 662 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
USP46-204ENST00000503060 CASC1Q6TDU7 716 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 ZCRB1Q8TBF4 217 aaKnown RBP14.2□□□□□ -0.14
USP46-204ENST00000503060 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
USP46-204ENST00000503060 SNX21Q969T3 373 aa14.2□□□□□ -0.14
USP46-204ENST00000503060 SURF6O75683 361 aaKnown RBP14.19□□□□□ -0.14
USP46-204ENST00000503060 SNRPA1P09661 255 aaKnown RBP14.19□□□□□ -0.14
USP46-204ENST00000503060 FAM43BQ6ZT52 329 aaPredicted RBP14.19□□□□□ -0.14
USP46-204ENST00000503060 LINS1Q8NG48 757 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 CARD10Q9BWT7 1032 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 C9orf78Q9NZ63 289 aaPredicted RBP14.19□□□□□ -0.14
USP46-204ENST00000503060 STAP2Q9UGK3 403 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
USP46-204ENST00000503060 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
USP46-204ENST00000503060 MTX1Q13505 466 aa14.18□□□□□ -0.14
USP46-204ENST00000503060 CWF19L2Q2TBE0 894 aaKnown RBP14.18□□□□□ -0.14
USP46-204ENST00000503060 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
USP46-204ENST00000503060 PTMAP06454 111 aaKnown RBP14.17□□□□□ -0.14
USP46-204ENST00000503060 ANAPC15P60006 121 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 TSHZ3Q63HK5 1081 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 MYL6BP14649 208 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
USP46-204ENST00000503060 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 AOX1Q06278 1338 aa14.17□□□□□ -0.14
USP46-204ENST00000503060 IL2RBP14784 551 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 RIC3Q7Z5B4 369 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 RHPN1Q8TCX5 695 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 XAGE3Q8WTP9 111 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 TUBGCP6Q96RT7 1819 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 UTYO14607 1347 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 GLI3P10071 1580 aa14.16□□□□□ -0.14
USP46-204ENST00000503060 GRM8O00222 908 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 COPS6Q7L5N1 327 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 MAFGO15525 162 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
USP46-204ENST00000503060 IGKV5-2P06315 115 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 EVA1CP58658 441 aa14.15□□□□□ -0.14
USP46-204ENST00000503060 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
USP46-204ENST00000503060 BBXQ8WY36 941 aaPredicted RBP14.15□□□□□ -0.14
USP46-204ENST00000503060 ERC2O15083 957 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 REC8O95072 547 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 NEXNQ0ZGT2 675 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 NUTM1Q86Y26 1132 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 SUCLG2Q96I99 432 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 METTL22Q9BUU2 404 aaPredicted RBP14.14□□□□□ -0.15
USP46-204ENST00000503060 LAMB4A4D0S4 1761 aa14.14□□□□□ -0.15
USP46-204ENST00000503060 SHANK3Q9BYB0 1731 aa14.13□□□□□ -0.15
USP46-204ENST00000503060 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
USP46-204ENST00000503060 ANKRD13DQ6ZTN6 518 aa14.13□□□□□ -0.15
USP46-204ENST00000503060 KAZALD1Q96I82 304 aa14.13□□□□□ -0.15
USP46-204ENST00000503060 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
USP46-204ENST00000503060 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
USP46-204ENST00000503060 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
USP46-204ENST00000503060 DNAJC2Q99543 621 aaKnown RBP14.12□□□□□ -0.15
USP46-204ENST00000503060 MYD88Q99836 296 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 RABEP1Q15276 862 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 DDX54Q8TDD1 881 aaKnown RBP14.12□□□□□ -0.15
USP46-204ENST00000503060 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
USP46-204ENST00000503060 CD2BP2O95400 341 aaKnown RBP14.11□□□□□ -0.15
USP46-204ENST00000503060 GCKRQ14397 625 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 UBR2Q8IWV8 1755 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 CHMLP26374 656 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 PI4K2BQ8TCG2 481 aa14.11□□□□□ -0.15
USP46-204ENST00000503060 BICC1Q9H694 974 aaKnown RBP14.11□□□□□ -0.15
USP46-204ENST00000503060 KCPQ6ZWJ8 1503 aa14.1□□□□□ -0.15
USP46-204ENST00000503060 ERC1Q8IUD2 1116 aa14.1□□□□□ -0.15
USP46-204ENST00000503060 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
USP46-204ENST00000503060 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
USP46-204ENST00000503060 K7ELQ4 463 aaPredicted RBP14.1□□□□□ -0.15
USP46-204ENST00000503060 GPATCH11Q8N954 259 aa14.1□□□□□ -0.15
USP46-204ENST00000503060 USP42Q9H9J4 1324 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms