RNA–Protein interactions for RNA: ENST00000503025.5

RUFY3-205, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-205ENST00000503025 ZNF232Q9UNY5 417 aa6.38□□□□□ -1.39
RUFY3-205ENST00000503025 ELOA3CA0A087WX78 387 aaPredicted RBP6.37□□□□□ -1.39
RUFY3-205ENST00000503025 ELOA3DA6NLF2 546 aaPredicted RBP6.37□□□□□ -1.39
RUFY3-205ENST00000503025 NOS2P35228 1153 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 TEAD4Q15561 434 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 ELOA3BQ3SY89 546 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 LRRC69Q6ZNQ3 347 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 SYT9Q86SS6 491 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 Q8N3U1 123 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 ELOA3Q8NG57 546 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 TRIM11Q96F44 468 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 C1orf115Q9H7X2 142 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 STRN4Q9NRL3 753 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 COG6Q9Y2V7 657 aa6.37□□□□□ -1.39
RUFY3-205ENST00000503025 GPC6Q9Y625 555 aaPredicted RBP6.37□□□□□ -1.39
RUFY3-205ENST00000503025 SLC9A9Q8IVB4 645 aa6.36□□□□□ -1.39
RUFY3-205ENST00000503025 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
RUFY3-205ENST00000503025 ALG2Q9H553 416 aa6.36□□□□□ -1.39
RUFY3-205ENST00000503025 SERTM1A2A2V5 107 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 USP17L5A8MUK1 530 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 EML1O00423 815 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 SIN3BO75182 1162 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 GATA4P43694 442 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 NEUROD1Q13562 356 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 DOC2BQ14184 412 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 PRRT3Q5FWE3 981 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 TRIM50Q86XT4 487 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 DEPDC4Q8N2C3 294 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 CHMP3Q9Y3E7 222 aa6.35□□□□□ -1.39
RUFY3-205ENST00000503025 CCDC9Q9Y3X0 531 aaKnown RBP6.35□□□□□ -1.39
RUFY3-205ENST00000503025 EPHA4P54764 986 aa6.34□□□□□ -1.39
RUFY3-205ENST00000503025 TBCELQ5QJ74 424 aa6.34□□□□□ -1.39
RUFY3-205ENST00000503025 TNS4Q8IZW8 715 aa6.34□□□□□ -1.39
RUFY3-205ENST00000503025 RHPN1Q8TCX5 695 aa6.34□□□□□ -1.39
RUFY3-205ENST00000503025 SEMA6BQ9H3T3 888 aa6.34□□□□□ -1.39
RUFY3-205ENST00000503025 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
RUFY3-205ENST00000503025 RAD21O60216 631 aa6.33□□□□□ -1.4
RUFY3-205ENST00000503025 ATP1A2P50993 1020 aa6.33□□□□□ -1.4
RUFY3-205ENST00000503025 M0R082 166 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 APBA3O96018 575 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 PSMA6P60900 246 aaKnown RBP6.32□□□□□ -1.4
RUFY3-205ENST00000503025 TPCN2Q8NHX9 752 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
RUFY3-205ENST00000503025 MDFIQ99750 246 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
RUFY3-205ENST00000503025 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 SFSWAPQ12872 951 aaKnown RBP6.31□□□□□ -1.4
RUFY3-205ENST00000503025 C1orf53Q5VUE5 145 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 CEP63Q96MT8 703 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 SLC30A3Q99726 388 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 PRDM6Q9NQX0 595 aa6.31□□□□□ -1.4
RUFY3-205ENST00000503025 USP17L3A6NCW0 530 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 USP17L4A6NCW7 530 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 ADH7P40394 386 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 TRIM28Q13263 835 aaKnown RBP6.3□□□□□ -1.4
RUFY3-205ENST00000503025 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 USP17L2Q6R6M4 530 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 USP17L1Q7RTZ2 530 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 C7orf43Q8WVR3 580 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 NACC1Q96RE7 527 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
RUFY3-205ENST00000503025 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
RUFY3-205ENST00000503025 A6NJR5 290 aa6.29□□□□□ -1.4
RUFY3-205ENST00000503025 HIRAP54198 1017 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-205ENST00000503025 ZMYM1Q5SVZ6 1142 aa6.29□□□□□ -1.4
RUFY3-205ENST00000503025 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
RUFY3-205ENST00000503025 POM121Q96HA1 1249 aa6.29□□□□□ -1.4
RUFY3-205ENST00000503025 RBM19Q9Y4C8 960 aaKnown RBP6.29□□□□□ -1.4
RUFY3-205ENST00000503025 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 ALBP02768 609 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 ITGB7P26010 798 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 CLDN10P78369 228 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 RAB44Q7Z6P3 723 aaPredicted RBP6.28□□□□□ -1.4
RUFY3-205ENST00000503025 MICALL1Q8N3F8 863 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 HSH2DQ96JZ2 352 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 PHACTR1Q9C0D0 580 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 KIAA1024Q9UPX6 916 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 KCNH4Q9UQ05 1017 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 STARD13Q9Y3M8 1113 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 HCN4Q9Y3Q4 1203 aa6.28□□□□□ -1.4
RUFY3-205ENST00000503025 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
RUFY3-205ENST00000503025 SFI1A8K8P3 1242 aa6.27□□□□□ -1.41
RUFY3-205ENST00000503025 M0R2N6 131 aa6.27□□□□□ -1.41
RUFY3-205ENST00000503025 ZBTB7BO15156 539 aaPredicted RBP6.27□□□□□ -1.41
RUFY3-205ENST00000503025 KCNQ4P56696 695 aa6.27□□□□□ -1.41
RUFY3-205ENST00000503025 OGFOD1Q8N543 542 aa6.27□□□□□ -1.41
RUFY3-205ENST00000503025 CLUAP1Q96AJ1 413 aa6.27□□□□□ -1.41
RUFY3-205ENST00000503025 POM121CA8CG34 1229 aa6.26□□□□□ -1.41
RUFY3-205ENST00000503025 ATP9BO43861 1147 aa6.26□□□□□ -1.41
RUFY3-205ENST00000503025 PPP1R12BO60237 982 aaPredicted RBP6.26□□□□□ -1.41
RUFY3-205ENST00000503025 LILRB5O75023 590 aa6.26□□□□□ -1.41
RUFY3-205ENST00000503025 NID1P14543 1247 aa6.26□□□□□ -1.41
RUFY3-205ENST00000503025 TYRO3Q06418 890 aa6.26□□□□□ -1.41
RUFY3-205ENST00000503025 COL9A3Q14050 684 aaPredicted RBP6.26□□□□□ -1.41
RUFY3-205ENST00000503025 HIF1AQ16665 826 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms