RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
CNOT4-211ENST00000498534 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
CNOT4-211ENST00000498534 ST5P78524 1137 aa16.03■□□□□ 0.16
CNOT4-211ENST00000498534 CCDC24Q8N4L8 307 aa16.03■□□□□ 0.16
CNOT4-211ENST00000498534 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
CNOT4-211ENST00000498534 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
CNOT4-211ENST00000498534 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
CNOT4-211ENST00000498534 C21orf2O43822 256 aa16.02■□□□□ 0.16
CNOT4-211ENST00000498534 NEFMP07197 916 aa16.02■□□□□ 0.16
CNOT4-211ENST00000498534 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
CNOT4-211ENST00000498534 MCM10Q7L590 875 aa16.02■□□□□ 0.16
CNOT4-211ENST00000498534 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
CNOT4-211ENST00000498534 SIPA1L3O60292 1781 aaPredicted RBP16.01■□□□□ 0.15
CNOT4-211ENST00000498534 NFKBIEO00221 500 aa16.01■□□□□ 0.15
CNOT4-211ENST00000498534 PRELPP51888 382 aa16.01■□□□□ 0.15
CNOT4-211ENST00000498534 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
CNOT4-211ENST00000498534 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
CNOT4-211ENST00000498534 ERFEQ4G0M1 354 aa16■□□□□ 0.15
CNOT4-211ENST00000498534 SOGA3Q5TF21 947 aa16■□□□□ 0.15
CNOT4-211ENST00000498534 STYK1Q6J9G0 422 aa16■□□□□ 0.15
CNOT4-211ENST00000498534 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
CNOT4-211ENST00000498534 KLRG1Q96E93 195 aa16■□□□□ 0.15
CNOT4-211ENST00000498534 TNRC6CQ9HCJ0 1690 aaKnown RBP15.99■□□□□ 0.15
CNOT4-211ENST00000498534 SRGNP10124 158 aa15.99■□□□□ 0.15
CNOT4-211ENST00000498534 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
CNOT4-211ENST00000498534 HTRA3P83110 453 aa15.99■□□□□ 0.15
CNOT4-211ENST00000498534 POLA2Q14181 598 aa15.99■□□□□ 0.15
CNOT4-211ENST00000498534 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
CNOT4-211ENST00000498534 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
CNOT4-211ENST00000498534 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
CNOT4-211ENST00000498534 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
CNOT4-211ENST00000498534 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
CNOT4-211ENST00000498534 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
CNOT4-211ENST00000498534 LTBP3Q9NS15 1303 aa15.96■□□□□ 0.15
CNOT4-211ENST00000498534 RGL2O15211 777 aa15.96■□□□□ 0.15
CNOT4-211ENST00000498534 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
CNOT4-211ENST00000498534 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
CNOT4-211ENST00000498534 WDR90Q96KV7 1748 aa15.96■□□□□ 0.15
CNOT4-211ENST00000498534 SCN7AQ01118 1682 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 ANKRD31Q8N7Z5 1873 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 NPR1P16066 1061 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
CNOT4-211ENST00000498534 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
CNOT4-211ENST00000498534 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
CNOT4-211ENST00000498534 PNNQ9H307 717 aaKnown RBP15.95■□□□□ 0.14
CNOT4-211ENST00000498534 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CNOT4-211ENST00000498534 POTECB2RU33 542 aa15.93■□□□□ 0.14
CNOT4-211ENST00000498534 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
CNOT4-211ENST00000498534 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
CNOT4-211ENST00000498534 CCDC93Q567U6 631 aa15.92■□□□□ 0.14
CNOT4-211ENST00000498534 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
CNOT4-211ENST00000498534 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
CNOT4-211ENST00000498534 KLRG2A4D1S0 409 aaPredicted RBP15.91■□□□□ 0.14
CNOT4-211ENST00000498534 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
CNOT4-211ENST00000498534 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
CNOT4-211ENST00000498534 C7orf43Q8WVR3 580 aa15.91■□□□□ 0.14
CNOT4-211ENST00000498534 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
CNOT4-211ENST00000498534 DICER1Q9UPY3 1922 aaKnown RBP15.9■□□□□ 0.14
CNOT4-211ENST00000498534 HLFQ16534 295 aa15.9■□□□□ 0.14
CNOT4-211ENST00000498534 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
CNOT4-211ENST00000498534 NYXQ9GZU5 481 aa15.9■□□□□ 0.14
CNOT4-211ENST00000498534 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
CNOT4-211ENST00000498534 COL11A2P13942 1736 aaPredicted RBP15.9■□□□□ 0.14
CNOT4-211ENST00000498534 IQCA1LA6NCM1 817 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 ERVV-1B6SEH8 477 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 BCORQ6W2J9 1755 aa15.89■□□□□ 0.13
CNOT4-211ENST00000498534 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
CNOT4-211ENST00000498534 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
CNOT4-211ENST00000498534 PCNTO95613 3336 aa15.87■□□□□ 0.13
CNOT4-211ENST00000498534 EIF4A1P60842 406 aaKnown RBP15.87■□□□□ 0.13
CNOT4-211ENST00000498534 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
CNOT4-211ENST00000498534 CACNA1SQ13698 1873 aa15.86■□□□□ 0.13
CNOT4-211ENST00000498534 MYL6BP14649 208 aa15.86■□□□□ 0.13
CNOT4-211ENST00000498534 ZNF277Q9NRM2 450 aaPredicted RBP15.86■□□□□ 0.13
CNOT4-211ENST00000498534 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
CNOT4-211ENST00000498534 COL13A1Q5TAT6 717 aaPredicted RBP15.85■□□□□ 0.13
CNOT4-211ENST00000498534 CC2D2BQ6DHV5 1058 aa15.85■□□□□ 0.13
CNOT4-211ENST00000498534 SYNE4Q8N205 404 aa15.85■□□□□ 0.13
CNOT4-211ENST00000498534 RPGRQ92834 1020 aaKnown RBP15.85■□□□□ 0.13
CNOT4-211ENST00000498534 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
CNOT4-211ENST00000498534 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 LDHDQ86WU2 507 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
CNOT4-211ENST00000498534 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
CNOT4-211ENST00000498534 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 ARFGEF2Q9Y6D5 1785 aa15.84■□□□□ 0.13
CNOT4-211ENST00000498534 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 POTEJP0CG39 1038 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 GPTP24298 496 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms