RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
C4A-259ENST00000498271 SYCP1Q15431 976 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 ATP2B1P20020 1258 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
C4A-259ENST00000498271 SNX21Q969T3 373 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 TERF1P54274 439 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 KDM4AO75164 1064 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 RLBP1P12271 317 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
C4A-259ENST00000498271 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
C4A-259ENST00000498271 ZNF397Q8NF99 534 aaPredicted RBP17.48■□□□□ 0.39
C4A-259ENST00000498271 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 STX1AQ16623 288 aa17.48■□□□□ 0.39
C4A-259ENST00000498271 NEFHP12036 1026 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 GTF2A1P52655 376 aaPredicted RBP17.47■□□□□ 0.39
C4A-259ENST00000498271 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 SLC3A2P08195 630 aaKnown RBP17.47■□□□□ 0.39
C4A-259ENST00000498271 CCDC57Q2TAC2 916 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 ADGBQ8N7X0 1667 aa17.47■□□□□ 0.39
C4A-259ENST00000498271 TTC22Q5TAA0 569 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
C4A-259ENST00000498271 A0A1W2PP64 1363 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 ZFYVE27Q5T4F4 411 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 ZSCAN25Q6NSZ9 544 aa17.46■□□□□ 0.39
C4A-259ENST00000498271 TNRQ92752 1358 aa17.46■□□□□ 0.38
C4A-259ENST00000498271 KIF20AO95235 890 aa17.45■□□□□ 0.38
C4A-259ENST00000498271 MRPL50Q8N5N7 158 aaKnown RBP17.45■□□□□ 0.38
C4A-259ENST00000498271 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
C4A-259ENST00000498271 LMAN1P49257 510 aa17.45■□□□□ 0.38
C4A-259ENST00000498271 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
C4A-259ENST00000498271 EZRP15311 586 aaKnown RBP17.45■□□□□ 0.38
C4A-259ENST00000498271 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
C4A-259ENST00000498271 TAX1BP1Q86VP1 789 aa17.45■□□□□ 0.38
C4A-259ENST00000498271 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
C4A-259ENST00000498271 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 TUBB4BP68371 445 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 SPA17Q15506 151 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 LUZP1Q86V48 1076 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 GPATCH11Q8N954 259 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 DBF4Q9UBU7 674 aaPredicted RBP17.44■□□□□ 0.38
C4A-259ENST00000498271 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
C4A-259ENST00000498271 PRPF40BQ6NWY9 871 aaKnown RBP17.44■□□□□ 0.38
C4A-259ENST00000498271 FOXO3O43524 673 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 OGFRQ9NZT2 677 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 CEP126Q9P2H0 1117 aa17.44■□□□□ 0.38
C4A-259ENST00000498271 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 UBAP1LF5GYI3 381 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 KDM6BO15054 1643 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 RAD21O60216 631 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 UHRF1BP1LA0JNW5 1464 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
C4A-259ENST00000498271 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
C4A-259ENST00000498271 ZNF165P49910 485 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
C4A-259ENST00000498271 MEIS3Q99687 375 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 TRMT1Q9NXH9 659 aaKnown RBP17.42■□□□□ 0.38
C4A-259ENST00000498271 STX6O43752 255 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
C4A-259ENST00000498271 MYD88Q99836 296 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 BOLA2Q9H3K6 86 aa17.42■□□□□ 0.38
C4A-259ENST00000498271 PAFAH1B1P43034 410 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 ATP7AQ04656 1500 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 MNAT1P51948 309 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 ABCC1P33527 1531 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
C4A-259ENST00000498271 TANGO6Q9C0B7 1094 aa17.41■□□□□ 0.38
C4A-259ENST00000498271 RNF187Q5TA31 235 aaPredicted RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
C4A-259ENST00000498271 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 TTC21AQ8NDW8 1320 aa17.4■□□□□ 0.38
C4A-259ENST00000498271 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
C4A-259ENST00000498271 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
C4A-259ENST00000498271 KRT18P05783 430 aaKnown RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 NAA15Q9BXJ9 866 aaKnown RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 USO1O60763 962 aaKnown RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 GBP2P32456 591 aaPredicted RBP17.4■□□□□ 0.38
C4A-259ENST00000498271 VAMP4O75379 141 aa17.39■□□□□ 0.37
C4A-259ENST00000498271 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
C4A-259ENST00000498271 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms