RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
GCOM1-212ENST00000496627 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
GCOM1-212ENST00000496627 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.44
GCOM1-212ENST00000496627 SPG7Q9UQ90 795 aa17.77■□□□□ 0.44
GCOM1-212ENST00000496627 HEG1Q9ULI3 1381 aa17.76■□□□□ 0.43
GCOM1-212ENST00000496627 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
GCOM1-212ENST00000496627 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
GCOM1-212ENST00000496627 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
GCOM1-212ENST00000496627 PA2G4Q9UQ80 394 aaKnown RBP17.76■□□□□ 0.43
GCOM1-212ENST00000496627 NPHP4O75161 1426 aaPredicted RBP17.76■□□□□ 0.43
GCOM1-212ENST00000496627 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
GCOM1-212ENST00000496627 RASEFQ8IZ41 740 aa17.75■□□□□ 0.43
GCOM1-212ENST00000496627 TTC14Q96N46 770 aa17.75■□□□□ 0.43
GCOM1-212ENST00000496627 AK2P54819 239 aa17.75■□□□□ 0.43
GCOM1-212ENST00000496627 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
GCOM1-212ENST00000496627 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
GCOM1-212ENST00000496627 ZSCAN30Q86W11 494 aa17.75■□□□□ 0.43
GCOM1-212ENST00000496627 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
GCOM1-212ENST00000496627 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
GCOM1-212ENST00000496627 AACSQ86V21 672 aa17.74■□□□□ 0.43
GCOM1-212ENST00000496627 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
GCOM1-212ENST00000496627 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
GCOM1-212ENST00000496627 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
GCOM1-212ENST00000496627 GRM8O00222 908 aa17.73■□□□□ 0.43
GCOM1-212ENST00000496627 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
GCOM1-212ENST00000496627 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
GCOM1-212ENST00000496627 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
GCOM1-212ENST00000496627 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
GCOM1-212ENST00000496627 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
GCOM1-212ENST00000496627 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
GCOM1-212ENST00000496627 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
GCOM1-212ENST00000496627 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 KIF1AQ12756 1690 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.43
GCOM1-212ENST00000496627 EVI5LQ96CN4 794 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
GCOM1-212ENST00000496627 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
GCOM1-212ENST00000496627 C5P01031 1676 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 SCN11AQ9UI33 1791 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 PTH1RQ03431 593 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 PDLIM2Q96JY6 352 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
GCOM1-212ENST00000496627 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
GCOM1-212ENST00000496627 PHF14O94880 888 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 HS1BP3Q53T59 392 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
GCOM1-212ENST00000496627 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
GCOM1-212ENST00000496627 UTYO14607 1347 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 CPA1P15085 419 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 TSPY26PQ9H489 355 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 ERBB3P21860 1342 aa17.7■□□□□ 0.42
GCOM1-212ENST00000496627 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
GCOM1-212ENST00000496627 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
GCOM1-212ENST00000496627 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
GCOM1-212ENST00000496627 HIP1O00291 1037 aa17.69■□□□□ 0.42
GCOM1-212ENST00000496627 STX6O43752 255 aa17.69■□□□□ 0.42
GCOM1-212ENST00000496627 PDRG1Q9NUG6 133 aa17.69■□□□□ 0.42
GCOM1-212ENST00000496627 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
GCOM1-212ENST00000496627 NEXNQ0ZGT2 675 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 CYP46A1Q9Y6A2 500 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 SASH1O94885 1247 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 KCNJ4P48050 445 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
GCOM1-212ENST00000496627 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
GCOM1-212ENST00000496627 RNF214Q8ND24 703 aa17.68■□□□□ 0.42
GCOM1-212ENST00000496627 SYT1P21579 422 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 PDIA6Q15084 440 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 PROSER2Q86WR7 435 aaPredicted RBP17.67■□□□□ 0.42
GCOM1-212ENST00000496627 TMEM87AQ8NBN3 555 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
GCOM1-212ENST00000496627 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
GCOM1-212ENST00000496627 ADAMTSL3P82987 1691 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 MYL6BP14649 208 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 ZKSCAN1P17029 563 aaPredicted RBP17.67■□□□□ 0.42
GCOM1-212ENST00000496627 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 CCDC83Q8IWF9 413 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
GCOM1-212ENST00000496627 SIL1Q9H173 461 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
GCOM1-212ENST00000496627 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 LARGE1O95461 756 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
GCOM1-212ENST00000496627 ATP6V1DQ9Y5K8 247 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 F13A1P00488 732 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
GCOM1-212ENST00000496627 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
GCOM1-212ENST00000496627 KCNB2Q92953 911 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms