RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	BCL2L12	Q9HB09	334 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	LGR6	Q9HBX8	967 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.73	□□□□□ -0.69
NVL-223	ENST00000496393	VIRMA	Q69YN4	1812 aa	Known RBP	10.72	□□□□□ -0.69
NVL-223	ENST00000496393	CYP19A1	P11511	503 aa	Predicted RBP	10.72	□□□□□ -0.69
NVL-223	ENST00000496393	CANX	P27824	592 aa	Known RBP	10.72	□□□□□ -0.69
NVL-223	ENST00000496393	LCE2D	Q5TA82	110 aa	Predicted RBP	10.72	□□□□□ -0.69
NVL-223	ENST00000496393	CCDC24	Q8N4L8	307 aa		10.72	□□□□□ -0.69
NVL-223	ENST00000496393	SLC52A2	Q9HAB3	445 aa		10.72	□□□□□ -0.69
NVL-223	ENST00000496393	NARF	Q9UHQ1	456 aa		10.72	□□□□□ -0.69
NVL-223	ENST00000496393	MRC1	P22897	1456 aa		10.72	□□□□□ -0.69
NVL-223	ENST00000496393	COL11A2	P13942	1736 aa	Predicted RBP	10.72	□□□□□ -0.69
NVL-223	ENST00000496393	IL13	P35225	146 aa		10.71	□□□□□ -0.69
NVL-223	ENST00000496393	TIE1	P35590	1138 aa		10.71	□□□□□ -0.69
NVL-223	ENST00000496393	MAMSTR	Q6ZN01	415 aa		10.71	□□□□□ -0.69
NVL-223	ENST00000496393	ANKRD31	Q8N7Z5	1873 aa		10.71	□□□□□ -0.69
NVL-223	ENST00000496393	MKRN1	Q9UHC7	482 aa	Known RBP	10.71	□□□□□ -0.69
NVL-223	ENST00000496393	COLQ	Q9Y215	455 aa	Predicted RBP	10.71	□□□□□ -0.69
NVL-223	ENST00000496393	TTLL13P	A6NNM8	815 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393	POTEC	B2RU33	542 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393		H0YIN7	160 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393	HMOX1	P09601	288 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393	AKAP4	Q5JQC9	854 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
NVL-223	ENST00000496393	FAM163A	Q96GL9	167 aa	Predicted RBP	10.7	□□□□□ -0.7
NVL-223	ENST00000496393	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.7	□□□□□ -0.7
NVL-223	ENST00000496393	CACNA1S	Q13698	1873 aa		10.7	□□□□□ -0.7
NVL-223	ENST00000496393	RNMT	O43148	476 aa	Known RBP	10.69	□□□□□ -0.7
NVL-223	ENST00000496393	C21orf2	O43822	256 aa		10.69	□□□□□ -0.7
NVL-223	ENST00000496393	SCN7A	Q01118	1682 aa		10.69	□□□□□ -0.7
NVL-223	ENST00000496393	UBR2	Q8IWV8	1755 aa		10.68	□□□□□ -0.7
NVL-223	ENST00000496393	HSPA5	P11021	654 aa	Known RBP	10.68	□□□□□ -0.7
NVL-223	ENST00000496393	NUBP1	P53384	320 aa		10.68	□□□□□ -0.7
NVL-223	ENST00000496393	ERFE	Q4G0M1	354 aa		10.68	□□□□□ -0.7
NVL-223	ENST00000496393	TBC1D9B	Q66K14	1250 aa		10.68	□□□□□ -0.7
NVL-223	ENST00000496393	MTHFSD	Q2M296	383 aa	Known RBP	10.67	□□□□□ -0.7
NVL-223	ENST00000496393	DPY19L2	Q6NUT2	758 aa		10.67	□□□□□ -0.7
NVL-223	ENST00000496393	SCUBE2	Q9NQ36	999 aa		10.67	□□□□□ -0.7
NVL-223	ENST00000496393	FER1L6	Q2WGJ9	1857 aa		10.67	□□□□□ -0.7
NVL-223	ENST00000496393	DICER1	Q9UPY3	1922 aa	Known RBP	10.66	□□□□□ -0.7
NVL-223	ENST00000496393	DDN	O94850	711 aa	Predicted RBP	10.66	□□□□□ -0.7
NVL-223	ENST00000496393	PRR5L	Q6MZQ0	368 aa		10.66	□□□□□ -0.7
NVL-223	ENST00000496393	TBC1D2B	Q9UPU7	963 aa		10.66	□□□□□ -0.7
NVL-223	ENST00000496393	NPHP1	O15259	732 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	FOXN1	O15353	648 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	EIF5	P55010	431 aa	Known RBP	10.65	□□□□□ -0.7
NVL-223	ENST00000496393	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
NVL-223	ENST00000496393	TTC5	Q8N0Z6	440 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	TAOK3	Q9H2K8	898 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	KNSTRN	Q9Y448	316 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	PCDHB13	Q9Y5F0	798 aa		10.65	□□□□□ -0.7
NVL-223	ENST00000496393	SLX4	Q8IY92	1834 aa		10.65	□□□□□ -0.71
NVL-223	ENST00000496393	STARD3NL	O95772	234 aa		10.64	□□□□□ -0.71
NVL-223	ENST00000496393	PDE6B	P35913	854 aa		10.64	□□□□□ -0.71
NVL-223	ENST00000496393	VSIG10	Q8N0Z9	540 aa		10.64	□□□□□ -0.71
NVL-223	ENST00000496393	ZNF496	Q96IT1	587 aa	Predicted RBP	10.64	□□□□□ -0.71
NVL-223	ENST00000496393	BRIP1	Q9BX63	1249 aa		10.64	□□□□□ -0.71
NVL-223	ENST00000496393		A0A087WZG4	1122 aa		10.63	□□□□□ -0.71
NVL-223	ENST00000496393	CNGB1	Q14028	1251 aa	Predicted RBP	10.63	□□□□□ -0.71
NVL-223	ENST00000496393	PRPF40B	Q6NWY9	871 aa	Known RBP	10.63	□□□□□ -0.71
NVL-223	ENST00000496393	CNBD1	Q8NA66	436 aa		10.63	□□□□□ -0.71
NVL-223	ENST00000496393	TRIM35	Q9UPQ4	493 aa		10.63	□□□□□ -0.71
NVL-223	ENST00000496393	CNTNAP1	P78357	1384 aa		10.63	□□□□□ -0.71
NVL-223	ENST00000496393	HEG1	Q9ULI3	1381 aa		10.63	□□□□□ -0.71
NVL-223	ENST00000496393	SEC24B	O95487	1268 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	A1BG	P04217	495 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	PIP4K2A	P48426	406 aa	Predicted RBP	10.62	□□□□□ -0.71
NVL-223	ENST00000496393	EAPP	Q56P03	285 aa	Predicted RBP	10.62	□□□□□ -0.71
NVL-223	ENST00000496393	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.62	□□□□□ -0.71
NVL-223	ENST00000496393	IFNL1	Q8IU54	200 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	PCGF6	Q9BYE7	350 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	BCOR	Q6W2J9	1755 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	ARFGEF2	Q9Y6D5	1785 aa		10.62	□□□□□ -0.71
NVL-223	ENST00000496393	ZNF541	Q9H0D2	1346 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	LTBP3	Q9NS15	1303 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	DIAPH1	O60610	1272 aa	Known RBP	10.61	□□□□□ -0.71
NVL-223	ENST00000496393	CAMTA2	O94983	1202 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	ST5	P78524	1137 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	TEF	Q10587	303 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	CNKSR1	Q969H4	720 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	AIDA	Q96BJ3	306 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	SETDB2	Q96T68	719 aa		10.61	□□□□□ -0.71
NVL-223	ENST00000496393	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.61	□□□□□ -0.71
NVL-223	ENST00000496393	SIPA1L3	O60292	1781 aa	Predicted RBP	10.61	□□□□□ -0.71
NVL-223	ENST00000496393	PASK	Q96RG2	1323 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	U2SURP	O15042	1029 aa	Known RBP	10.6	□□□□□ -0.71
NVL-223	ENST00000496393	KCNQ3	O43525	872 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	SRGN	P10124	158 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	IL6ST	P40189	918 aa	Predicted RBP	10.6	□□□□□ -0.71
NVL-223	ENST00000496393	VEGFB	P49765	207 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	TRIM26	Q12899	539 aa	Predicted RBP	10.6	□□□□□ -0.71
NVL-223	ENST00000496393	CC2D1B	Q5T0F9	858 aa	Known RBP	10.6	□□□□□ -0.71
NVL-223	ENST00000496393	STYK1	Q6J9G0	422 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	ZNF790	Q6PG37	636 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	OLFM4	Q6UX06	510 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	NPM2	Q86SE8	214 aa	Known RBP	10.6	□□□□□ -0.71
NVL-223	ENST00000496393	LDHD	Q86WU2	507 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	IL17RE	Q8NFR9	667 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	TIMELESS	Q9UNS1	1208 aa		10.6	□□□□□ -0.71
NVL-223	ENST00000496393	PDZRN3	Q9UPQ7	1066 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms