RNA–Protein interactions for RNA: ENST00000496216.5

STX1A-213, Transcript of syntaxin 1A, humanhuman

TSL 5

Gene STX1A, Length 714 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-213ENST00000496216 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
STX1A-213ENST00000496216 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
STX1A-213ENST00000496216 HEG1Q9ULI3 1381 aa20.22■□□□□ 0.83
STX1A-213ENST00000496216 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
STX1A-213ENST00000496216 ABHD8Q96I13 439 aa20.22■□□□□ 0.83
STX1A-213ENST00000496216 NPR1P16066 1061 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 EPHX2P34913 555 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 FKBP4Q02790 459 aaKnown RBP eCLIP20.21■□□□□ 0.83
STX1A-213ENST00000496216 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 CNTROBQ8N137 903 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
STX1A-213ENST00000496216 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
STX1A-213ENST00000496216 CCDC88AQ3V6T2 1871 aa20.2■□□□□ 0.82
STX1A-213ENST00000496216 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
STX1A-213ENST00000496216 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
STX1A-213ENST00000496216 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
STX1A-213ENST00000496216 HSPA8P11142 646 aaKnown RBP20.19■□□□□ 0.82
STX1A-213ENST00000496216 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
STX1A-213ENST00000496216 GNAT3A8MTJ3 354 aa20.18■□□□□ 0.82
STX1A-213ENST00000496216 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
STX1A-213ENST00000496216 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
STX1A-213ENST00000496216 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
STX1A-213ENST00000496216 ZNF652Q9Y2D9 606 aa20.18■□□□□ 0.82
STX1A-213ENST00000496216 KLRG2A4D1S0 409 aaPredicted RBP20.17■□□□□ 0.82
STX1A-213ENST00000496216 A1BGP04217 495 aa20.17■□□□□ 0.82
STX1A-213ENST00000496216 HSPA5P11021 654 aaKnown RBP20.17■□□□□ 0.82
STX1A-213ENST00000496216 TPTE2Q6XPS3 522 aa20.17■□□□□ 0.82
STX1A-213ENST00000496216 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
STX1A-213ENST00000496216 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
STX1A-213ENST00000496216 SCN4AP35499 1836 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 FZD9O00144 591 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 RGL2O15211 777 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 ALDH1B1P30837 517 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 GPC2Q8N158 579 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
STX1A-213ENST00000496216 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
STX1A-213ENST00000496216 ECE1P42892 770 aa20.15■□□□□ 0.82
STX1A-213ENST00000496216 MLLT1Q03111 559 aaPredicted RBP20.15■□□□□ 0.82
STX1A-213ENST00000496216 AMER1Q5JTC6 1135 aaPredicted RBP20.15■□□□□ 0.82
STX1A-213ENST00000496216 JDP2Q8WYK2 163 aa20.15■□□□□ 0.82
STX1A-213ENST00000496216 PCDH10Q9P2E7 1040 aa20.15■□□□□ 0.82
STX1A-213ENST00000496216 ZNF541Q9H0D2 1346 aa20.15■□□□□ 0.82
STX1A-213ENST00000496216 ANKRD31Q8N7Z5 1873 aa20.15■□□□□ 0.82
STX1A-213ENST00000496216 IARSP41252 1262 aaKnown RBP20.14■□□□□ 0.81
STX1A-213ENST00000496216 MAP1SQ66K74 1059 aaPredicted RBP20.14■□□□□ 0.81
STX1A-213ENST00000496216 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
STX1A-213ENST00000496216 RGS19P49795 217 aa20.13■□□□□ 0.81
STX1A-213ENST00000496216 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
STX1A-213ENST00000496216 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
STX1A-213ENST00000496216 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
STX1A-213ENST00000496216 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
STX1A-213ENST00000496216 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
STX1A-213ENST00000496216 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
STX1A-213ENST00000496216 COL11A2P13942 1736 aaPredicted RBP20.11■□□□□ 0.81
STX1A-213ENST00000496216 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
STX1A-213ENST00000496216 LMOD1P29536 600 aaPredicted RBP20.11■□□□□ 0.81
STX1A-213ENST00000496216 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
STX1A-213ENST00000496216 PSMD1Q99460 953 aa20.11■□□□□ 0.81
STX1A-213ENST00000496216 CCDC85CA6NKD9 419 aa20.1■□□□□ 0.81
STX1A-213ENST00000496216 EIF6P56537 245 aaKnown RBP20.1■□□□□ 0.81
STX1A-213ENST00000496216 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
STX1A-213ENST00000496216 CAPNS2Q96L46 248 aa20.09■□□□□ 0.81
STX1A-213ENST00000496216 GPR101Q96P66 508 aaPredicted RBP20.09■□□□□ 0.81
STX1A-213ENST00000496216 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
STX1A-213ENST00000496216 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
STX1A-213ENST00000496216 GTF2E1P29083 439 aaPredicted RBP20.08■□□□□ 0.81
STX1A-213ENST00000496216 PAXIP1Q6ZW49 1069 aaPredicted RBP20.08■□□□□ 0.81
STX1A-213ENST00000496216 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
STX1A-213ENST00000496216 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
STX1A-213ENST00000496216 MAP2K2P36507 400 aa20.07■□□□□ 0.8
STX1A-213ENST00000496216 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
STX1A-213ENST00000496216 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
STX1A-213ENST00000496216 CA12O43570 354 aa20.06■□□□□ 0.8
STX1A-213ENST00000496216 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
STX1A-213ENST00000496216 USP50Q70EL3 339 aaPredicted RBP20.06■□□□□ 0.8
STX1A-213ENST00000496216 GJA3Q9Y6H8 435 aa20.06■□□□□ 0.8
STX1A-213ENST00000496216 ADAMTSL1Q8N6G6 1762 aa20.06■□□□□ 0.8
STX1A-213ENST00000496216 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
STX1A-213ENST00000496216 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
STX1A-213ENST00000496216 KCNQ3O43525 872 aa20.04■□□□□ 0.8
STX1A-213ENST00000496216 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
STX1A-213ENST00000496216 TLL2Q9Y6L7 1015 aa20.03■□□□□ 0.8
STX1A-213ENST00000496216 PIP4K2AP48426 406 aaPredicted RBP20.02■□□□□ 0.8
STX1A-213ENST00000496216 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
STX1A-213ENST00000496216 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
STX1A-213ENST00000496216 FAM177BA6PVY3 158 aa20.01■□□□□ 0.79
STX1A-213ENST00000496216 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
STX1A-213ENST00000496216 EPS15P42566 896 aa20.01■□□□□ 0.79
STX1A-213ENST00000496216 GRM1Q13255 1194 aa20.01■□□□□ 0.79
STX1A-213ENST00000496216 CST9Q5W186 159 aa20.01■□□□□ 0.79
STX1A-213ENST00000496216 LARGE2Q8N3Y3 721 aa20.01■□□□□ 0.79
STX1A-213ENST00000496216 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
STX1A-213ENST00000496216 SCNN1DP51172 638 aa20■□□□□ 0.79
STX1A-213ENST00000496216 CC2D1BQ5T0F9 858 aaKnown RBP20■□□□□ 0.79
STX1A-213ENST00000496216 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
STX1A-213ENST00000496216 VPS33BQ9H267 617 aa20■□□□□ 0.79
STX1A-213ENST00000496216 HOXA10P31260 410 aaPredicted RBP19.99■□□□□ 0.79
STX1A-213ENST00000496216 RPGRQ92834 1020 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms