RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
COL1A1-209ENST00000495677 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
COL1A1-209ENST00000495677 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
COL1A1-209ENST00000495677 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
COL1A1-209ENST00000495677 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
COL1A1-209ENST00000495677 VEGFBP49765 207 aa18.22■□□□□ 0.51
COL1A1-209ENST00000495677 ST5P78524 1137 aa18.22■□□□□ 0.51
COL1A1-209ENST00000495677 KLRG2A4D1S0 409 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-209ENST00000495677 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
COL1A1-209ENST00000495677 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.51
COL1A1-209ENST00000495677 CCDC24Q8N4L8 307 aa18.21■□□□□ 0.51
COL1A1-209ENST00000495677 IL17REQ8NFR9 667 aa18.21■□□□□ 0.51
COL1A1-209ENST00000495677 AIDAQ96BJ3 306 aa18.21■□□□□ 0.51
COL1A1-209ENST00000495677 TEFQ10587 303 aa18.2■□□□□ 0.5
COL1A1-209ENST00000495677 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
COL1A1-209ENST00000495677 GNAT3A8MTJ3 354 aa18.19■□□□□ 0.5
COL1A1-209ENST00000495677 A1BGP04217 495 aa18.19■□□□□ 0.5
COL1A1-209ENST00000495677 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-209ENST00000495677 CCDC93Q567U6 631 aa18.19■□□□□ 0.5
COL1A1-209ENST00000495677 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
COL1A1-209ENST00000495677 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
COL1A1-209ENST00000495677 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
COL1A1-209ENST00000495677 RGL2O15211 777 aa18.18■□□□□ 0.5
COL1A1-209ENST00000495677 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL1A1-209ENST00000495677 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-209ENST00000495677 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
COL1A1-209ENST00000495677 NPHP1O15259 732 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 SLC34A2O95436 690 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 NPR1P16066 1061 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 DEFB115Q30KQ5 88 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
COL1A1-209ENST00000495677 HACL1Q9UJ83 578 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
COL1A1-209ENST00000495677 FZD9O00144 591 aa18.16■□□□□ 0.5
COL1A1-209ENST00000495677 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-209ENST00000495677 LBX1P52954 281 aa18.16■□□□□ 0.5
COL1A1-209ENST00000495677 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
COL1A1-209ENST00000495677 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-209ENST00000495677 EPHX2P34913 555 aa18.15■□□□□ 0.5
COL1A1-209ENST00000495677 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-209ENST00000495677 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
COL1A1-209ENST00000495677 CNTROBQ8N137 903 aa18.14■□□□□ 0.49
COL1A1-209ENST00000495677 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
COL1A1-209ENST00000495677 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
COL1A1-209ENST00000495677 ALDH1B1P30837 517 aa18.13■□□□□ 0.49
COL1A1-209ENST00000495677 EAPPQ56P03 285 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-209ENST00000495677 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-209ENST00000495677 CLEC11AQ9Y240 323 aa18.13■□□□□ 0.49
COL1A1-209ENST00000495677 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
COL1A1-209ENST00000495677 ZNF541Q9H0D2 1346 aa18.13■□□□□ 0.49
COL1A1-209ENST00000495677 THSD7BQ9C0I4 1608 aa18.12■□□□□ 0.49
COL1A1-209ENST00000495677 NUP98P52948 1817 aa18.12■□□□□ 0.49
COL1A1-209ENST00000495677 GPC2Q8N158 579 aa18.12■□□□□ 0.49
COL1A1-209ENST00000495677 ABHD8Q96I13 439 aa18.12■□□□□ 0.49
COL1A1-209ENST00000495677 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
COL1A1-209ENST00000495677 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
COL1A1-209ENST00000495677 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
COL1A1-209ENST00000495677 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
COL1A1-209ENST00000495677 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
COL1A1-209ENST00000495677 SNED1Q8TER0 1413 aa18.1■□□□□ 0.49
COL1A1-209ENST00000495677 KCNQ3O43525 872 aa18.1■□□□□ 0.49
COL1A1-209ENST00000495677 RGS19P49795 217 aa18.1■□□□□ 0.49
COL1A1-209ENST00000495677 SYNE4Q8N205 404 aa18.1■□□□□ 0.49
COL1A1-209ENST00000495677 PSMD1Q99460 953 aa18.1■□□□□ 0.49
COL1A1-209ENST00000495677 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
COL1A1-209ENST00000495677 MAP1SQ66K74 1059 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-209ENST00000495677 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
COL1A1-209ENST00000495677 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.48
COL1A1-209ENST00000495677 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
COL1A1-209ENST00000495677 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL1A1-209ENST00000495677 LTBP1Q14766 1721 aa18.08■□□□□ 0.48
COL1A1-209ENST00000495677 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
COL1A1-209ENST00000495677 JDP2Q8WYK2 163 aa18.07■□□□□ 0.48
COL1A1-209ENST00000495677 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL1A1-209ENST00000495677 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
COL1A1-209ENST00000495677 ECE1P42892 770 aa18.06■□□□□ 0.48
COL1A1-209ENST00000495677 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
COL1A1-209ENST00000495677 OLFM4Q6UX06 510 aa18.06■□□□□ 0.48
COL1A1-209ENST00000495677 KIF7Q2M1P5 1343 aa18.05■□□□□ 0.48
COL1A1-209ENST00000495677 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
COL1A1-209ENST00000495677 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
COL1A1-209ENST00000495677 ABT1Q9ULW3 272 aaKnown RBP18.05■□□□□ 0.48
COL1A1-209ENST00000495677 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
COL1A1-209ENST00000495677 CASP8AP2Q9UKL3 1982 aa18.04■□□□□ 0.48
COL1A1-209ENST00000495677 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
COL1A1-209ENST00000495677 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
COL1A1-209ENST00000495677 PIP4K2AP48426 406 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-209ENST00000495677 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
COL1A1-209ENST00000495677 CC2D1BQ5T0F9 858 aaKnown RBP18.04■□□□□ 0.48
COL1A1-209ENST00000495677 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
COL1A1-209ENST00000495677 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
COL1A1-209ENST00000495677 USP50Q70EL3 339 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-209ENST00000495677 CAPNS2Q96L46 248 aa18.03■□□□□ 0.48
COL1A1-209ENST00000495677 LMOD1P29536 600 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-209ENST00000495677 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-209ENST00000495677 MAP2K2P36507 400 aa18.02■□□□□ 0.48
COL1A1-209ENST00000495677 MLLT1Q03111 559 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-209ENST00000495677 GPR101Q96P66 508 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-209ENST00000495677 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.48
COL1A1-209ENST00000495677 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms