RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 FURINP09958 794 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 CLDN10P78369 228 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 UCN2Q96RP3 112 aa9.72□□□□□ -0.85
SRRM1-219ENST00000495561 GPC6Q9Y625 555 aaPredicted RBP9.72□□□□□ -0.85
SRRM1-219ENST00000495561 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
SRRM1-219ENST00000495561 CHRNA4P43681 627 aa9.71□□□□□ -0.86
SRRM1-219ENST00000495561 SYT9Q86SS6 491 aa9.71□□□□□ -0.86
SRRM1-219ENST00000495561 TRIM11Q96F44 468 aa9.71□□□□□ -0.86
SRRM1-219ENST00000495561 MDFIQ99750 246 aa9.71□□□□□ -0.86
SRRM1-219ENST00000495561 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-219ENST00000495561 ELOA3DA6NLF2 546 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-219ENST00000495561 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 FLIIQ13045 1269 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 ELOA3BQ3SY89 546 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 ELOA3Q8NG57 546 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
SRRM1-219ENST00000495561 ATP9BO43861 1147 aa9.69□□□□□ -0.86
SRRM1-219ENST00000495561 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
SRRM1-219ENST00000495561 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
SRRM1-219ENST00000495561 TSPAN10Q9H1Z9 355 aaPredicted RBP9.69□□□□□ -0.86
SRRM1-219ENST00000495561 PSMA6P60900 246 aaKnown RBP9.68□□□□□ -0.86
SRRM1-219ENST00000495561 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
SRRM1-219ENST00000495561 PLVAPQ9BX97 442 aa9.68□□□□□ -0.86
SRRM1-219ENST00000495561 SIN3BO75182 1162 aa9.67□□□□□ -0.86
SRRM1-219ENST00000495561 HIRAP54198 1017 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-219ENST00000495561 XP32Q5T750 250 aa9.67□□□□□ -0.86
SRRM1-219ENST00000495561 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
SRRM1-219ENST00000495561 OGFOD1Q8N543 542 aa9.67□□□□□ -0.86
SRRM1-219ENST00000495561 ALAS2P22557 587 aa9.66□□□□□ -0.86
SRRM1-219ENST00000495561 C1orf53Q5VUE5 145 aa9.66□□□□□ -0.86
SRRM1-219ENST00000495561 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
SRRM1-219ENST00000495561 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
SRRM1-219ENST00000495561 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
SRRM1-219ENST00000495561 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
SRRM1-219ENST00000495561 ADARB2-AS1A8MUL3 147 aa9.65□□□□□ -0.86
SRRM1-219ENST00000495561 M0R2N6 131 aa9.65□□□□□ -0.86
SRRM1-219ENST00000495561 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
SRRM1-219ENST00000495561 PHACTR1Q9C0D0 580 aa9.65□□□□□ -0.86
SRRM1-219ENST00000495561 SPATA31C1P0DKV0 1188 aa9.64□□□□□ -0.87
SRRM1-219ENST00000495561 SPEM2Q0P670 501 aa9.64□□□□□ -0.87
SRRM1-219ENST00000495561 SIX5Q8N196 739 aa9.64□□□□□ -0.87
SRRM1-219ENST00000495561 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
SRRM1-219ENST00000495561 CHMP3Q9Y3E7 222 aa9.64□□□□□ -0.87
SRRM1-219ENST00000495561 DKK1O94907 266 aa9.63□□□□□ -0.87
SRRM1-219ENST00000495561 TNFRSF25Q93038 417 aa9.63□□□□□ -0.87
SRRM1-219ENST00000495561 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
SRRM1-219ENST00000495561 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
SRRM1-219ENST00000495561 SFI1A8K8P3 1242 aa9.62□□□□□ -0.87
SRRM1-219ENST00000495561 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
SRRM1-219ENST00000495561 ZNF280CQ8ND82 737 aa9.62□□□□□ -0.87
SRRM1-219ENST00000495561 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
SRRM1-219ENST00000495561 ANKIB1Q9P2G1 1089 aa9.62□□□□□ -0.87
SRRM1-219ENST00000495561 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
SRRM1-219ENST00000495561 M0R082 166 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 C21orf2O43822 256 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 PPP1R12BO60237 982 aaPredicted RBP9.61□□□□□ -0.87
SRRM1-219ENST00000495561 KCNQ4P56696 695 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 TYRO3Q06418 890 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
SRRM1-219ENST00000495561 ZNF417Q8TAU3 575 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 SUSD3Q96L08 255 aa9.61□□□□□ -0.87
SRRM1-219ENST00000495561 ZNF587Q96SQ5 575 aaPredicted RBP9.61□□□□□ -0.87
SRRM1-219ENST00000495561 ADH7P40394 386 aa9.6□□□□□ -0.87
SRRM1-219ENST00000495561 DOC2BQ14184 412 aa9.6□□□□□ -0.87
SRRM1-219ENST00000495561 SPDYE3A6NKU9 549 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 ALBP02768 609 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 GATA4P43694 442 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 C8orf86Q6ZUL3 223 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 KCNH4Q9UQ05 1017 aa9.59□□□□□ -0.87
SRRM1-219ENST00000495561 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
SRRM1-219ENST00000495561 ITGB7P26010 798 aa9.58□□□□□ -0.88
SRRM1-219ENST00000495561 PRRT3Q5FWE3 981 aa9.58□□□□□ -0.88
SRRM1-219ENST00000495561 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
SRRM1-219ENST00000495561 MICALL1Q8N3F8 863 aa9.58□□□□□ -0.88
SRRM1-219ENST00000495561 GLMNQ92990 594 aa9.58□□□□□ -0.88
SRRM1-219ENST00000495561 RASA1P20936 1047 aa9.57□□□□□ -0.88
SRRM1-219ENST00000495561 STAG2Q8N3U4 1231 aa9.57□□□□□ -0.88
SRRM1-219ENST00000495561 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
SRRM1-219ENST00000495561 C2orf49Q9BVC5 232 aaPredicted RBP9.57□□□□□ -0.88
SRRM1-219ENST00000495561 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
SRRM1-219ENST00000495561 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
SRRM1-219ENST00000495561 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
SRRM1-219ENST00000495561 Q8N3U1 123 aa9.56□□□□□ -0.88
SRRM1-219ENST00000495561 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-219ENST00000495561 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
SRRM1-219ENST00000495561 MAFBQ9Y5Q3 323 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-219ENST00000495561 NID1P14543 1247 aa9.55□□□□□ -0.88
SRRM1-219ENST00000495561 SEC13P55735 322 aa9.55□□□□□ -0.88
SRRM1-219ENST00000495561 C20orf204Q6ZNR8 217 aa9.55□□□□□ -0.88
SRRM1-219ENST00000495561 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
SRRM1-219ENST00000495561 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
SRRM1-219ENST00000495561 BHMTQ93088 406 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms