RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
NUP58-214ENST00000495460 SOGA3Q5TF21 947 aa20.15■□□□□ 0.82
NUP58-214ENST00000495460 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
NUP58-214ENST00000495460 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
NUP58-214ENST00000495460 SETDB2Q96T68 719 aa20.15■□□□□ 0.82
NUP58-214ENST00000495460 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
NUP58-214ENST00000495460 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
NUP58-214ENST00000495460 RASSF7Q02833 373 aa20.14■□□□□ 0.81
NUP58-214ENST00000495460 STYK1Q6J9G0 422 aa20.14■□□□□ 0.81
NUP58-214ENST00000495460 CNKSR1Q969H4 720 aa20.14■□□□□ 0.81
NUP58-214ENST00000495460 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
NUP58-214ENST00000495460 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
NUP58-214ENST00000495460 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
NUP58-214ENST00000495460 MKRN4PQ13434 485 aaPredicted RBP20.13■□□□□ 0.81
NUP58-214ENST00000495460 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
NUP58-214ENST00000495460 DICER1Q9UPY3 1922 aaKnown RBP20.13■□□□□ 0.81
NUP58-214ENST00000495460 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
NUP58-214ENST00000495460 ANKRD31Q8N7Z5 1873 aa20.13■□□□□ 0.81
NUP58-214ENST00000495460 CCDC88AQ3V6T2 1871 aa20.12■□□□□ 0.81
NUP58-214ENST00000495460 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
NUP58-214ENST00000495460 TBC1D2BQ9UPU7 963 aa20.12■□□□□ 0.81
NUP58-214ENST00000495460 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
NUP58-214ENST00000495460 SPDYE2BA6NHP3 402 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 POTECB2RU33 542 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 SPDYE6P0CI01 402 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 SRGNP10124 158 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
NUP58-214ENST00000495460 A1BGP04217 495 aa20.1■□□□□ 0.81
NUP58-214ENST00000495460 EVX2Q03828 476 aa20.1■□□□□ 0.81
NUP58-214ENST00000495460 BICDL1Q6ZP65 573 aa20.1■□□□□ 0.81
NUP58-214ENST00000495460 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
NUP58-214ENST00000495460 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.812e-15■□□□□ 10.3
NUP58-214ENST00000495460 MASTLQ96GX5 879 aa20.1■□□□□ 0.81
NUP58-214ENST00000495460 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
NUP58-214ENST00000495460 ST5P78524 1137 aa20.09■□□□□ 0.81
NUP58-214ENST00000495460 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
NUP58-214ENST00000495460 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
NUP58-214ENST00000495460 C21orf2O43822 256 aa20.08■□□□□ 0.81
NUP58-214ENST00000495460 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
NUP58-214ENST00000495460 ERFEQ4G0M1 354 aa20.08■□□□□ 0.81
NUP58-214ENST00000495460 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
NUP58-214ENST00000495460 USP16Q9Y5T5 823 aa20.08■□□□□ 0.81
NUP58-214ENST00000495460 C7orf43Q8WVR3 580 aa20.07■□□□□ 0.8
NUP58-214ENST00000495460 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
NUP58-214ENST00000495460 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
NUP58-214ENST00000495460 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
NUP58-214ENST00000495460 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
NUP58-214ENST00000495460 HTRA3P83110 453 aa20.05■□□□□ 0.8
NUP58-214ENST00000495460 TPTE2Q6XPS3 522 aa20.05■□□□□ 0.8
NUP58-214ENST00000495460 KCNQ3O43525 872 aa20.04■□□□□ 0.8
NUP58-214ENST00000495460 NPR1P16066 1061 aa20.04■□□□□ 0.8
NUP58-214ENST00000495460 PRPF40BQ6NWY9 871 aaKnown RBP20.04■□□□□ 0.8
NUP58-214ENST00000495460 COL11A2P13942 1736 aaPredicted RBP20.04■□□□□ 0.8
NUP58-214ENST00000495460 L3MBTL3Q96JM7 780 aaPredicted RBP20.03■□□□□ 0.8
NUP58-214ENST00000495460 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
NUP58-214ENST00000495460 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
NUP58-214ENST00000495460 IQCA1LA6NCM1 817 aa20.02■□□□□ 0.8
NUP58-214ENST00000495460 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
NUP58-214ENST00000495460 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
NUP58-214ENST00000495460 NPHP1O15259 732 aa20.01■□□□□ 0.79
NUP58-214ENST00000495460 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
NUP58-214ENST00000495460 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
NUP58-214ENST00000495460 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
NUP58-214ENST00000495460 CHADLQ6NUI6 762 aa20.01■□□□□ 0.79
NUP58-214ENST00000495460 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
NUP58-214ENST00000495460 CREBZFQ9NS37 354 aa20.01■□□□□ 0.79
NUP58-214ENST00000495460 ALDH1B1P30837 517 aa20■□□□□ 0.79
NUP58-214ENST00000495460 COL13A1Q5TAT6 717 aaPredicted RBP20■□□□□ 0.79
NUP58-214ENST00000495460 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
NUP58-214ENST00000495460 SCN4AP35499 1836 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
NUP58-214ENST00000495460 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
NUP58-214ENST00000495460 MCM10Q7L590 875 aa19.98■□□□□ 0.79
NUP58-214ENST00000495460 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.79
NUP58-214ENST00000495460 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
NUP58-214ENST00000495460 CCDC24Q8N4L8 307 aa19.97■□□□□ 0.79
NUP58-214ENST00000495460 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
NUP58-214ENST00000495460 DDNO94850 711 aaPredicted RBP19.96■□□□□ 0.79
NUP58-214ENST00000495460 CRY2Q49AN0 593 aa19.96■□□□□ 0.79
NUP58-214ENST00000495460 LDHDQ86WU2 507 aa19.96■□□□□ 0.79
NUP58-214ENST00000495460 NYXQ9GZU5 481 aa19.96■□□□□ 0.79
NUP58-214ENST00000495460 PRAMEF22A3QJZ6 481 aa19.95■□□□□ 0.78
NUP58-214ENST00000495460 PSMD1Q99460 953 aa19.95■□□□□ 0.78
NUP58-214ENST00000495460 RIC1Q4ADV7 1423 aa19.94■□□□□ 0.78
NUP58-214ENST00000495460 FZD9O00144 591 aa19.94■□□□□ 0.78
NUP58-214ENST00000495460 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
NUP58-214ENST00000495460 TAF1DQ9H5J8 278 aaPredicted RBP19.94■□□□□ 0.78
NUP58-214ENST00000495460 CLEC11AQ9Y240 323 aa19.94■□□□□ 0.78
NUP58-214ENST00000495460 PASKQ96RG2 1323 aa19.94■□□□□ 0.78
NUP58-214ENST00000495460 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
NUP58-214ENST00000495460 NEFMP07197 916 aa19.93■□□□□ 0.78
NUP58-214ENST00000495460 HOXA10P31260 410 aaPredicted RBP19.93■□□□□ 0.78
NUP58-214ENST00000495460 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
NUP58-214ENST00000495460 HSPA1AP0DMV8 641 aaKnown RBP19.92■□□□□ 0.78
NUP58-214ENST00000495460 HSPA1BP0DMV9 641 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms