RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
CCDC30-211ENST00000495044 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
CCDC30-211ENST00000495044 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
CCDC30-211ENST00000495044 PASKQ96RG2 1323 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC30-211ENST00000495044 MTHFSDQ2M296 383 aaKnown RBP9.94□□□□□ -0.82
CCDC30-211ENST00000495044 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
CCDC30-211ENST00000495044 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 SIPA1L3O60292 1781 aaPredicted RBP9.94□□□□□ -0.82
CCDC30-211ENST00000495044 VEGFBP49765 207 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 TEFQ10587 303 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 MASTLQ96GX5 879 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 TAF1DQ9H5J8 278 aaPredicted RBP9.94□□□□□ -0.82
CCDC30-211ENST00000495044 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
CCDC30-211ENST00000495044 IL6STP40189 918 aaPredicted RBP9.93□□□□□ -0.82
CCDC30-211ENST00000495044 LBX1P52954 281 aa9.93□□□□□ -0.82
CCDC30-211ENST00000495044 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
CCDC30-211ENST00000495044 SRGNP10124 158 aa9.92□□□□□ -0.82
CCDC30-211ENST00000495044 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
CCDC30-211ENST00000495044 ZNF496Q96IT1 587 aaPredicted RBP9.92□□□□□ -0.82
CCDC30-211ENST00000495044 HACL1Q9UJ83 578 aa9.92□□□□□ -0.82
CCDC30-211ENST00000495044 ADAMTSL1Q8N6G6 1762 aa9.92□□□□□ -0.82
CCDC30-211ENST00000495044 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
CCDC30-211ENST00000495044 HSPA5P11021 654 aaKnown RBP9.92□□□□□ -0.82
CCDC30-211ENST00000495044 ZNF790Q6PG37 636 aa9.92□□□□□ -0.82
CCDC30-211ENST00000495044 NBPF5PQ86XG9 351 aaPredicted RBP9.91□□□□□ -0.82
CCDC30-211ENST00000495044 FMNL2Q96PY5 1086 aa9.91□□□□□ -0.82
CCDC30-211ENST00000495044 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
CCDC30-211ENST00000495044 ZNF541Q9H0D2 1346 aa9.91□□□□□ -0.82
CCDC30-211ENST00000495044 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 EPHX2P34913 555 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 FKBP4Q02790 459 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 PNMA8AQ86V59 439 aaPredicted RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 ABT1Q9ULW3 272 aaKnown RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 ZNF652Q9Y2D9 606 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 SLC34A2O95436 690 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 ITGBL1O95965 494 aaPredicted RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 A1BGP04217 495 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 NPR1P16066 1061 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 MAP2K1Q02750 393 aaPredicted RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 DEFB115Q30KQ5 88 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 FAM161AQ3B820 660 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 ABHD8Q96I13 439 aa9.9□□□□□ -0.82
CCDC30-211ENST00000495044 ZNF277Q9NRM2 450 aaPredicted RBP9.9□□□□□ -0.82
CCDC30-211ENST00000495044 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 RASSF10A6NK89 507 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 HSPA8P11142 646 aaKnown RBP9.89□□□□□ -0.83
CCDC30-211ENST00000495044 RTKN2Q8IZC4 609 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 WDR33Q9C0J8 1336 aaKnown RBP9.89□□□□□ -0.83
CCDC30-211ENST00000495044 MAP1SQ66K74 1059 aaPredicted RBP9.89□□□□□ -0.83
CCDC30-211ENST00000495044 PAXIP1Q6ZW49 1069 aaPredicted RBP9.89□□□□□ -0.83
CCDC30-211ENST00000495044 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 BEGAINQ9BUH8 593 aa9.89□□□□□ -0.83
CCDC30-211ENST00000495044 THSD7BQ9C0I4 1608 aa9.88□□□□□ -0.83
CCDC30-211ENST00000495044 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
CCDC30-211ENST00000495044 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
CCDC30-211ENST00000495044 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 IARSP41252 1262 aaKnown RBP9.87□□□□□ -0.83
CCDC30-211ENST00000495044 C7orf43Q8WVR3 580 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 JDP2Q8WYK2 163 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
CCDC30-211ENST00000495044 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
CCDC30-211ENST00000495044 GRM1Q13255 1194 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 CLEC4GQ6UXB4 293 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 TPTE2Q6XPS3 522 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 GPC2Q8N158 579 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 IL17REQ8NFR9 667 aa9.87□□□□□ -0.83
CCDC30-211ENST00000495044 CLSPNQ9HAW4 1339 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 TRPM7Q96QT4 1865 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 FAM177BA6PVY3 158 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
CCDC30-211ENST00000495044 ALDH1B1P30837 517 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 ECE1P42892 770 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 EIF6P56537 245 aaKnown RBP9.86□□□□□ -0.83
CCDC30-211ENST00000495044 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
CCDC30-211ENST00000495044 CC2D1BQ5T0F9 858 aaKnown RBP9.86□□□□□ -0.83
CCDC30-211ENST00000495044 OLFM4Q6UX06 510 aa9.86□□□□□ -0.83
CCDC30-211ENST00000495044 NIP7Q9Y221 180 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC30-211ENST00000495044 FZD9O00144 591 aa9.85□□□□□ -0.83
CCDC30-211ENST00000495044 MLLT1Q03111 559 aaPredicted RBP9.85□□□□□ -0.83
CCDC30-211ENST00000495044 SYNE4Q8N205 404 aa9.85□□□□□ -0.83
CCDC30-211ENST00000495044 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC30-211ENST00000495044 GJA3Q9Y6H8 435 aa9.85□□□□□ -0.83
CCDC30-211ENST00000495044 COL3A1P02461 1466 aaPredicted RBP9.85□□□□□ -0.83
CCDC30-211ENST00000495044 CEMIPQ8WUJ3 1361 aa9.85□□□□□ -0.83
CCDC30-211ENST00000495044 LAMB4A4D0S4 1761 aa9.84□□□□□ -0.83
CCDC30-211ENST00000495044 KLRG2A4D1S0 409 aaPredicted RBP9.84□□□□□ -0.83
CCDC30-211ENST00000495044 KCNQ3O43525 872 aa9.84□□□□□ -0.83
CCDC30-211ENST00000495044 CAPNS2Q96L46 248 aa9.84□□□□□ -0.83
CCDC30-211ENST00000495044 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
CCDC30-211ENST00000495044 LTBP1Q14766 1721 aa9.84□□□□□ -0.83
CCDC30-211ENST00000495044 SNRPA1P09661 255 aaKnown RBP9.83□□□□□ -0.84
CCDC30-211ENST00000495044 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
CCDC30-211ENST00000495044 PSMD1Q99460 953 aa9.83□□□□□ -0.84
CCDC30-211ENST00000495044 CNGB1Q14028 1251 aaPredicted RBP9.83□□□□□ -0.84
CCDC30-211ENST00000495044 CYP4F22Q6NT55 531 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms