RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CREBZFQ9NS37 354 aa19.11■□□□□ 0.65
VARS-228ENST00000495010 FER1L6Q2WGJ9 1857 aa19.11■□□□□ 0.65
VARS-228ENST00000495010 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
VARS-228ENST00000495010 IQCA1LA6NCM1 817 aa19.1■□□□□ 0.65
VARS-228ENST00000495010 NBPF5PQ86XG9 351 aaPredicted RBP19.1■□□□□ 0.65
VARS-228ENST00000495010 CFAP53Q96M91 514 aa19.1■□□□□ 0.65
VARS-228ENST00000495010 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
VARS-228ENST00000495010 MKRN1Q9UHC7 482 aaKnown RBP19.09■□□□□ 0.65
VARS-228ENST00000495010 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
VARS-228ENST00000495010 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
VARS-228ENST00000495010 KCNQ3O43525 872 aa19.08■□□□□ 0.64
VARS-228ENST00000495010 PRKAR2BP31323 418 aa19.08■□□□□ 0.64
VARS-228ENST00000495010 CCDC93Q567U6 631 aa19.08■□□□□ 0.64
VARS-228ENST00000495010 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
VARS-228ENST00000495010 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.64
VARS-228ENST00000495010 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
VARS-228ENST00000495010 CEMIPQ8WUJ3 1361 aa19.07■□□□□ 0.64
VARS-228ENST00000495010 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
VARS-228ENST00000495010 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
VARS-228ENST00000495010 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
VARS-228ENST00000495010 CACNA1SQ13698 1873 aa19.07■□□□□ 0.64
VARS-228ENST00000495010 SLX4Q8IY92 1834 aa19.07■□□□□ 0.64
VARS-228ENST00000495010 SNRPA1P09661 255 aaKnown RBP19.06■□□□□ 0.64
VARS-228ENST00000495010 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 NPR1P16066 1061 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 LDHDQ86WU2 507 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 PHACTR3Q96KR7 559 aa19.06■□□□□ 0.64
VARS-228ENST00000495010 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
VARS-228ENST00000495010 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
VARS-228ENST00000495010 NIP7Q9Y221 180 aaKnown RBP eCLIP19.04■□□□□ 0.64
VARS-228ENST00000495010 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
VARS-228ENST00000495010 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
VARS-228ENST00000495010 FKBP4Q02790 459 aaKnown RBP eCLIP19.03■□□□□ 0.64
VARS-228ENST00000495010 RTKN2Q8IZC4 609 aa19.03■□□□□ 0.64
VARS-228ENST00000495010 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
VARS-228ENST00000495010 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
VARS-228ENST00000495010 TAF1DQ9H5J8 278 aaPredicted RBP19.03■□□□□ 0.64
VARS-228ENST00000495010 CLEC11AQ9Y240 323 aa19.03■□□□□ 0.64
VARS-228ENST00000495010 ARFGEF2Q9Y6D5 1785 aa19.03■□□□□ 0.64
VARS-228ENST00000495010 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
VARS-228ENST00000495010 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
VARS-228ENST00000495010 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
VARS-228ENST00000495010 MCM10Q7L590 875 aa19.02■□□□□ 0.64
VARS-228ENST00000495010 C7orf43Q8WVR3 580 aa19.02■□□□□ 0.64
VARS-228ENST00000495010 AIDAQ96BJ3 306 aa19.02■□□□□ 0.64
VARS-228ENST00000495010 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
VARS-228ENST00000495010 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
VARS-228ENST00000495010 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
VARS-228ENST00000495010 CNTNAP1P78357 1384 aa19.01■□□□□ 0.63
VARS-228ENST00000495010 SCN4AP35499 1836 aa19■□□□□ 0.63
VARS-228ENST00000495010 TMEM88BA6NKF7 163 aa19■□□□□ 0.63
VARS-228ENST00000495010 PASKQ96RG2 1323 aa19■□□□□ 0.63
VARS-228ENST00000495010 KLRG2A4D1S0 409 aaPredicted RBP18.99■□□□□ 0.63
VARS-228ENST00000495010 RGL2O15211 777 aa18.99■□□□□ 0.63
VARS-228ENST00000495010 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
VARS-228ENST00000495010 FOXN1O15353 648 aa18.98■□□□□ 0.63
VARS-228ENST00000495010 EPHX2P34913 555 aa18.98■□□□□ 0.63
VARS-228ENST00000495010 PNMA8AQ86V59 439 aaPredicted RBP18.98■□□□□ 0.63
VARS-228ENST00000495010 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
VARS-228ENST00000495010 IARSP41252 1262 aaKnown RBP18.97■□□□□ 0.63
VARS-228ENST00000495010 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
VARS-228ENST00000495010 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
VARS-228ENST00000495010 SYNE4Q8N205 404 aa18.97■□□□□ 0.63
VARS-228ENST00000495010 JDP2Q8WYK2 163 aa18.97■□□□□ 0.63
VARS-228ENST00000495010 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
VARS-228ENST00000495010 NEFMP07197 916 aa18.96■□□□□ 0.63
VARS-228ENST00000495010 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
VARS-228ENST00000495010 VEGFBP49765 207 aa18.96■□□□□ 0.63
VARS-228ENST00000495010 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
VARS-228ENST00000495010 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
VARS-228ENST00000495010 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
VARS-228ENST00000495010 NYXQ9GZU5 481 aa18.96■□□□□ 0.63
VARS-228ENST00000495010 PCNTO95613 3336 aa18.95■□□□□ 0.62
VARS-228ENST00000495010 ITGBL1O95965 494 aaPredicted RBP18.95■□□□□ 0.62
VARS-228ENST00000495010 HLFQ16534 295 aa18.95■□□□□ 0.62
VARS-228ENST00000495010 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
VARS-228ENST00000495010 PRDM10Q9NQV6 1147 aa18.95■□□□□ 0.62
VARS-228ENST00000495010 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
VARS-228ENST00000495010 FZD9O00144 591 aa18.94■□□□□ 0.62
VARS-228ENST00000495010 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
VARS-228ENST00000495010 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
VARS-228ENST00000495010 GPC2Q8N158 579 aa18.94■□□□□ 0.62
VARS-228ENST00000495010 DEFB115Q30KQ5 88 aa18.93■□□□□ 0.62
VARS-228ENST00000495010 MAP1SQ66K74 1059 aaPredicted RBP18.93■□□□□ 0.62
VARS-228ENST00000495010 RPGRQ92834 1020 aaKnown RBP18.93■□□□□ 0.62
VARS-228ENST00000495010 LMOD1P29536 600 aaPredicted RBP18.92■□□□□ 0.62
VARS-228ENST00000495010 PPP2R1AP30153 589 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 CC2D2BQ6DHV5 1058 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 KIF6Q6ZMV9 814 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 PSMD1Q99460 953 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 ABT1Q9ULW3 272 aaKnown RBP18.92■□□□□ 0.62
VARS-228ENST00000495010 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
VARS-228ENST00000495010 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
VARS-228ENST00000495010 PNISRQ8TF01 805 aaKnown RBP18.91■□□□□ 0.62
VARS-228ENST00000495010 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
VARS-228ENST00000495010 WBP1LQ9NX94 342 aa18.9■□□□□ 0.62
VARS-228ENST00000495010 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms