RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 BRCA1P38398 1863 aaKnown RBP9.08□□□□□ -0.96
SEC23B-208ENST00000494645 CARMIL3Q8ND23 1372 aa9.08□□□□□ -0.96
SEC23B-208ENST00000494645 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
SEC23B-208ENST00000494645 TEFQ10587 303 aa9.07□□□□□ -0.96
SEC23B-208ENST00000494645 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
SEC23B-208ENST00000494645 SMC1BQ8NDV3 1235 aa9.07□□□□□ -0.96
SEC23B-208ENST00000494645 ZNF496Q96IT1 587 aaPredicted RBP9.07□□□□□ -0.96
SEC23B-208ENST00000494645 ADAMTS7Q9UKP4 1686 aa9.07□□□□□ -0.96
SEC23B-208ENST00000494645 ARFGEF1Q9Y6D6 1849 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 A0A087WZG4 1122 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 GLTPD2A6NH11 291 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 NFKBIEO00221 500 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 NPHP1O15259 732 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 PER1O15534 1290 aaPredicted RBP9.06□□□□□ -0.96
SEC23B-208ENST00000494645 KCNQ3O43525 872 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 C21orf2O43822 256 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
SEC23B-208ENST00000494645 COL13A1Q5TAT6 717 aaPredicted RBP9.06□□□□□ -0.96
SEC23B-208ENST00000494645 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 KIF12Q96FN5 646 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 MRC1P22897 1456 aa9.06□□□□□ -0.96
SEC23B-208ENST00000494645 GNAT3A8MTJ3 354 aa9.05□□□□□ -0.96
SEC23B-208ENST00000494645 A1BGP04217 495 aa9.05□□□□□ -0.96
SEC23B-208ENST00000494645 VEGFAP15692 232 aaPredicted RBP9.05□□□□□ -0.96
SEC23B-208ENST00000494645 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
SEC23B-208ENST00000494645 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
SEC23B-208ENST00000494645 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
SEC23B-208ENST00000494645 POTEGQ6S5H5 508 aa9.05□□□□□ -0.96
SEC23B-208ENST00000494645 MIER1Q8N108 512 aa9.05□□□□□ -0.96
SEC23B-208ENST00000494645 HEG1Q9ULI3 1381 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 PDE6BP35913 854 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 PRR5LQ6MZQ0 368 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
SEC23B-208ENST00000494645 GAS2L2Q8NHY3 880 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 PHACTR3Q96KR7 559 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 WDR90Q96KV7 1748 aa9.04□□□□□ -0.96
SEC23B-208ENST00000494645 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
SEC23B-208ENST00000494645 BTBD11A6QL63 1104 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 ERFEQ4G0M1 354 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 JMYQ8N9B5 988 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 CNBD1Q8NA66 436 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 SETDB2Q96T68 719 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 BRIP1Q9BX63 1249 aa9.03□□□□□ -0.96
SEC23B-208ENST00000494645 TEX13AQ9BXU3 409 aaPredicted RBP9.03□□□□□ -0.96
SEC23B-208ENST00000494645 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
SEC23B-208ENST00000494645 PRAMEF22A3QJZ6 481 aa9.02□□□□□ -0.97
SEC23B-208ENST00000494645 POTECB2RU33 542 aa9.02□□□□□ -0.97
SEC23B-208ENST00000494645 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
SEC23B-208ENST00000494645 DPY19L2Q6NUT2 758 aa9.02□□□□□ -0.97
SEC23B-208ENST00000494645 DZIP3Q86Y13 1208 aaKnown RBP9.02□□□□□ -0.97
SEC23B-208ENST00000494645 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
SEC23B-208ENST00000494645 SBF1O95248 1867 aa9.02□□□□□ -0.97
SEC23B-208ENST00000494645 COL3A1P02461 1466 aaPredicted RBP9.02□□□□□ -0.97
SEC23B-208ENST00000494645 TNRC6CQ9HCJ0 1690 aaKnown RBP9.01□□□□□ -0.97
SEC23B-208ENST00000494645 POTEFA5A3E0 1075 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 ST5P78524 1137 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
SEC23B-208ENST00000494645 MCM10Q7L590 875 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 NBPF5PQ86XG9 351 aaPredicted RBP9.01□□□□□ -0.97
SEC23B-208ENST00000494645 TNS4Q8IZW8 715 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 TAOK3Q9H2K8 898 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
SEC23B-208ENST00000494645 NRXN2Q9P2S2 1712 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 USP16Q9Y5T5 823 aa9.01□□□□□ -0.97
SEC23B-208ENST00000494645 DDNO94850 711 aaPredicted RBP9□□□□□ -0.97
SEC23B-208ENST00000494645 HSPA1AP0DMV8 641 aaKnown RBP9□□□□□ -0.97
SEC23B-208ENST00000494645 HSPA1BP0DMV9 641 aaKnown RBP9□□□□□ -0.97
SEC23B-208ENST00000494645 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
SEC23B-208ENST00000494645 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.97
SEC23B-208ENST00000494645 DCTN1Q14203 1278 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 MAMSTRQ6ZN01 415 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 RASEFQ8IZ41 740 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 CNKSR1Q969H4 720 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 CFAP53Q96M91 514 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 RSPH6AQ9H0K4 717 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
SEC23B-208ENST00000494645 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 VIRMAQ69YN4 1812 aaKnown RBP8.99□□□□□ -0.97
SEC23B-208ENST00000494645 MAP3K13O43283 966 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 SRGNP10124 158 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
SEC23B-208ENST00000494645 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 OLFM4Q6UX06 510 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 RTF1Q92541 710 aaKnown RBP8.99□□□□□ -0.97
SEC23B-208ENST00000494645 MASTLQ96GX5 879 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 MIS18AQ9NYP9 233 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
SEC23B-208ENST00000494645 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
SEC23B-208ENST00000494645 TIAM2Q8IVF5 1701 aa8.98□□□□□ -0.97
SEC23B-208ENST00000494645 SNRPA1P09661 255 aaKnown RBP8.98□□□□□ -0.97
SEC23B-208ENST00000494645 NGEFQ8N5V2 710 aa8.98□□□□□ -0.97
SEC23B-208ENST00000494645 ZNF277Q9NRM2 450 aaPredicted RBP8.98□□□□□ -0.97
SEC23B-208ENST00000494645 NIP7Q9Y221 180 aaKnown RBP eCLIP8.98□□□□□ -0.97
SEC23B-208ENST00000494645 NUDCQ9Y266 331 aa8.98□□□□□ -0.97
SEC23B-208ENST00000494645 DLEC1Q9Y238 1755 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms