RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 CDC45O75419 566 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
ATG4B-225ENST00000494465 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-225ENST00000494465 SLC4A3P48751 1232 aa20.43■□□□□ 0.86
ATG4B-225ENST00000494465 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
ATG4B-225ENST00000494465 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
ATG4B-225ENST00000494465 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
ATG4B-225ENST00000494465 SDSP20132 328 aa20.43■□□□□ 0.86
ATG4B-225ENST00000494465 THRAP3Q9Y2W1 955 aaKnown RBP20.42■□□□□ 0.86
ATG4B-225ENST00000494465 DOT1LQ8TEK3 1739 aa20.42■□□□□ 0.86
ATG4B-225ENST00000494465 UBAP1LF5GYI3 381 aa20.42■□□□□ 0.86
ATG4B-225ENST00000494465 KAT6BQ8WYB5 2073 aa20.42■□□□□ 0.86
ATG4B-225ENST00000494465 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
ATG4B-225ENST00000494465 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 RHPN1Q8TCX5 695 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-225ENST00000494465 STAP2Q9UGK3 403 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 SPATA31A5Q5VU36 1347 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 SPATA31A7Q8IWB4 1347 aa20.41■□□□□ 0.86
ATG4B-225ENST00000494465 MX1P20591 662 aa20.4■□□□□ 0.86
ATG4B-225ENST00000494465 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
ATG4B-225ENST00000494465 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.4■□□□□ 0.86
ATG4B-225ENST00000494465 RBM25P49756 843 aaKnown RBP20.39■□□□□ 0.86
ATG4B-225ENST00000494465 TSHZ3Q63HK5 1081 aa20.39■□□□□ 0.86
ATG4B-225ENST00000494465 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
ATG4B-225ENST00000494465 TJP1Q07157 1748 aa20.38■□□□□ 0.85
ATG4B-225ENST00000494465 ATP5J2-PTCD1G3V325 749 aa20.37■□□□□ 0.85
ATG4B-225ENST00000494465 HSP90AB4PQ58FF6 505 aa20.37■□□□□ 0.85
ATG4B-225ENST00000494465 EPHA10Q5JZY3 1008 aa20.37■□□□□ 0.85
ATG4B-225ENST00000494465 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
ATG4B-225ENST00000494465 COL15A1P39059 1388 aa20.37■□□□□ 0.85
ATG4B-225ENST00000494465 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
ATG4B-225ENST00000494465 CASP7P55210 303 aa20.36■□□□□ 0.85
ATG4B-225ENST00000494465 SLC4A9Q96Q91 983 aa20.36■□□□□ 0.85
ATG4B-225ENST00000494465 AOX1Q06278 1338 aa20.36■□□□□ 0.85
ATG4B-225ENST00000494465 DDB1Q16531 1140 aa20.36■□□□□ 0.85
ATG4B-225ENST00000494465 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-225ENST00000494465 BARGINQ6ZT62 677 aa20.35■□□□□ 0.85
ATG4B-225ENST00000494465 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
ATG4B-225ENST00000494465 JARID2Q92833 1246 aaPredicted RBP20.35■□□□□ 0.85
ATG4B-225ENST00000494465 PRIM1P49642 420 aaKnown RBP20.34■□□□□ 0.85
ATG4B-225ENST00000494465 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
ATG4B-225ENST00000494465 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
ATG4B-225ENST00000494465 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
ATG4B-225ENST00000494465 MARCH10Q8NA82 808 aaPredicted RBP20.34■□□□□ 0.85
ATG4B-225ENST00000494465 JCADQ9P266 1359 aa20.34■□□□□ 0.85
ATG4B-225ENST00000494465 A0A087WZG4 1122 aa20.33■□□□□ 0.85
ATG4B-225ENST00000494465 RABL6Q3YEC7 729 aaPredicted RBP20.32■□□□□ 0.84
ATG4B-225ENST00000494465 KIF2CQ99661 725 aa20.32■□□□□ 0.84
ATG4B-225ENST00000494465 ZBTB3Q9H5J0 574 aa20.32■□□□□ 0.84
ATG4B-225ENST00000494465 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
ATG4B-225ENST00000494465 PI4K2BQ8TCG2 481 aa20.32■□□□□ 0.84
ATG4B-225ENST00000494465 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
ATG4B-225ENST00000494465 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
ATG4B-225ENST00000494465 H7C1W4 665 aa20.31■□□□□ 0.84
ATG4B-225ENST00000494465 STARD3NLO95772 234 aa20.31■□□□□ 0.84
ATG4B-225ENST00000494465 BECN1Q14457 450 aa20.31■□□□□ 0.84
ATG4B-225ENST00000494465 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
ATG4B-225ENST00000494465 OS9Q13438 667 aaPredicted RBP20.31■□□□□ 0.84
ATG4B-225ENST00000494465 ERC1Q8IUD2 1116 aa20.31■□□□□ 0.84
ATG4B-225ENST00000494465 USP42Q9H9J4 1324 aaKnown RBP20.31■□□□□ 0.84
ATG4B-225ENST00000494465 SASH1O94885 1247 aa20.3■□□□□ 0.84
ATG4B-225ENST00000494465 CYP19A1P11511 503 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-225ENST00000494465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-225ENST00000494465 AK9Q5TCS8 1911 aa20.3■□□□□ 0.84
ATG4B-225ENST00000494465 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-225ENST00000494465 CWC25Q9NXE8 425 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-225ENST00000494465 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
ATG4B-225ENST00000494465 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
ATG4B-225ENST00000494465 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
ATG4B-225ENST00000494465 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
ATG4B-225ENST00000494465 CASC1Q6TDU7 716 aa20.28■□□□□ 0.84
ATG4B-225ENST00000494465 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
ATG4B-225ENST00000494465 USP26Q9BXU7 913 aa20.28■□□□□ 0.84
ATG4B-225ENST00000494465 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
ATG4B-225ENST00000494465 C8orf37Q96NL8 207 aa20.28■□□□□ 0.84
ATG4B-225ENST00000494465 COPRSQ9NQ92 184 aa20.28■□□□□ 0.84
ATG4B-225ENST00000494465 FOXO4P98177 505 aa20.27■□□□□ 0.84
ATG4B-225ENST00000494465 G3BP1Q13283 466 aaKnown RBP eCLIP20.27■□□□□ 0.84
ATG4B-225ENST00000494465 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.83
ATG4B-225ENST00000494465 VPS72Q15906 364 aa20.27■□□□□ 0.83
ATG4B-225ENST00000494465 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 TTC41PQ6P2S7 1318 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-225ENST00000494465 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 NGLY1Q96IV0 654 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 TRIM6-TRIM34B2RNG4 842 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 SIL1Q9H173 461 aa20.26■□□□□ 0.83
ATG4B-225ENST00000494465 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-225ENST00000494465 CICQ96RK0 1608 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-225ENST00000494465 ERC2O15083 957 aa20.25■□□□□ 0.83
ATG4B-225ENST00000494465 CHMLP26374 656 aa20.25■□□□□ 0.83
ATG4B-225ENST00000494465 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
ATG4B-225ENST00000494465 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
ATG4B-225ENST00000494465 MAP3K15Q6ZN16 1313 aa20.24■□□□□ 0.83
ATG4B-225ENST00000494465 ANKRD36CQ5JPF3 1778 aa20.24■□□□□ 0.83
ATG4B-225ENST00000494465 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms