RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DDB1Q16531 1140 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 SSH3Q8TE77 659 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 USP35Q9P2H5 1018 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
MSH5-217ENST00000494458 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
MSH5-217ENST00000494458 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 GALR2O43603 387 aaPredicted RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 ANXA1P04083 346 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 IGKV5-2P06315 115 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 PDE4AP27815 886 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 ANKRD13DQ6ZTN6 518 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 SKAP1Q86WV1 359 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
MSH5-217ENST00000494458 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 THSD7AQ9UPZ6 1657 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 ITGB4P16144 1822 aa8.52□□□□□ -1.05
MSH5-217ENST00000494458 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
MSH5-217ENST00000494458 C8orf34Q49A92 452 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 SLC4A10Q6U841 1118 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 COPS6Q7L5N1 327 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 CHD1LQ86WJ1 897 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 ATRNO75882 1429 aa8.51□□□□□ -1.05
MSH5-217ENST00000494458 ZNF831Q5JPB2 1677 aa8.5□□□□□ -1.05
MSH5-217ENST00000494458 NBPF7P0C2Y1 421 aaPredicted RBP8.5□□□□□ -1.05
MSH5-217ENST00000494458 CYP19A1P11511 503 aaPredicted RBP8.5□□□□□ -1.05
MSH5-217ENST00000494458 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
MSH5-217ENST00000494458 KAZALD1Q96I82 304 aa8.5□□□□□ -1.05
MSH5-217ENST00000494458 C8orf37Q96NL8 207 aa8.5□□□□□ -1.05
MSH5-217ENST00000494458 HDAC5Q9UQL6 1122 aa8.5□□□□□ -1.05
MSH5-217ENST00000494458 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
MSH5-217ENST00000494458 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 HMMRO75330 724 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 A1BGP04217 495 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 CASP7P55210 303 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 GCKRQ14397 625 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 GJD4Q96KN9 370 aaPredicted RBP8.49□□□□□ -1.05
MSH5-217ENST00000494458 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 PCDH10Q9P2E7 1040 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 USP21Q9UK80 565 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 SALL3Q9BXA9 1300 aa8.49□□□□□ -1.05
MSH5-217ENST00000494458 PNMA6EA0A0J9YXQ4 647 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 H7C1W4 665 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 GRM8O00222 908 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 RGL2O15211 777 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 PTCD1O75127 700 aaKnown RBP8.48□□□□□ -1.05
MSH5-217ENST00000494458 STARD3NLO95772 234 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 UBTFL1P0CB47 393 aaPredicted RBP8.48□□□□□ -1.05
MSH5-217ENST00000494458 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
MSH5-217ENST00000494458 DNAJC10Q8IXB1 793 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 ISCA1Q9BUE6 129 aa8.48□□□□□ -1.05
MSH5-217ENST00000494458 LRRFIP2Q9Y608 721 aaKnown RBP8.48□□□□□ -1.05
MSH5-217ENST00000494458 RREB1Q92766 1687 aa8.47□□□□□ -1.05
MSH5-217ENST00000494458 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
MSH5-217ENST00000494458 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
MSH5-217ENST00000494458 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
MSH5-217ENST00000494458 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
MSH5-217ENST00000494458 SMARCC1Q92922 1105 aaPredicted RBP8.47□□□□□ -1.05
MSH5-217ENST00000494458 NUP188Q5SRE5 1749 aa8.46□□□□□ -1.05
MSH5-217ENST00000494458 ERVV-1B6SEH8 477 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 RAB11FIP3O75154 756 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 MYL6BP14649 208 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
MSH5-217ENST00000494458 RGS3P49796 1198 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
MSH5-217ENST00000494458 NEXNQ0ZGT2 675 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 TCIRG1Q13488 830 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 CWF19L2Q2TBE0 894 aaKnown RBP8.46□□□□□ -1.06
MSH5-217ENST00000494458 BMP2KLQ5H9B9 411 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 ANKRD45Q5TZF3 282 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 INTS5Q6P9B9 1019 aaKnown RBP8.46□□□□□ -1.06
MSH5-217ENST00000494458 PPP1R42Q7Z4L9 355 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 CCDC191Q8NCU4 936 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 STAP2Q9UGK3 403 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 TRPC5Q9UL62 973 aaPredicted RBP8.46□□□□□ -1.06
MSH5-217ENST00000494458 AFF2P51816 1311 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 TJP1Q07157 1748 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 DOT1LQ8TEK3 1739 aa8.46□□□□□ -1.06
MSH5-217ENST00000494458 LOC102724428A0A0B4J2F2 783 aa8.45□□□□□ -1.06
MSH5-217ENST00000494458 SIK1P57059 783 aa8.45□□□□□ -1.06
MSH5-217ENST00000494458 AIMP1Q12904 312 aaKnown RBP8.45□□□□□ -1.06
MSH5-217ENST00000494458 SUCLG2Q96I99 432 aa8.45□□□□□ -1.06
MSH5-217ENST00000494458 LNPKQ9C0E8 428 aa8.45□□□□□ -1.06
MSH5-217ENST00000494458 ARFGEF2Q9Y6D5 1785 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 KCNQ2O43526 872 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 RFX5P48382 616 aaPredicted RBP8.44□□□□□ -1.06
MSH5-217ENST00000494458 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
MSH5-217ENST00000494458 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms