RNA–Protein interactions for RNA: ENST00000493934.1

SLF1-205, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-205ENST00000493934 ARHGEF12Q9NZN5 1544 aa4.51□□□□□ -1.69
SLF1-205ENST00000493934 A6NJR5 290 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 NEURL1BA8MQ27 555 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 HRCP23327 699 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 CLCN1P35523 988 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 SH3D19Q5HYK7 790 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 CCDC82Q8N4S0 544 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 ZNF784Q8NCA9 323 aaPredicted RBP4.5□□□□□ -1.69
SLF1-205ENST00000493934 TIMMDC1Q9NPL8 285 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 EFCAB5A4FU69 1503 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 ZFYVE16Q7Z3T8 1539 aa4.5□□□□□ -1.69
SLF1-205ENST00000493934 RAPGEF2Q9Y4G8 1499 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 RICTORQ6R327 1708 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 MEN1O00255 615 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 TRAK2O60296 914 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 FGFR3P22607 806 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 MCM6Q14566 821 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 LBRQ14739 615 aaKnown RBP4.49□□□□□ -1.69
SLF1-205ENST00000493934 NBPF20Q3BBV1 942 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 FAM217BQ9NTX9 383 aaPredicted RBP4.49□□□□□ -1.69
SLF1-205ENST00000493934 ATP1B4Q9UN42 357 aaPredicted RBP4.49□□□□□ -1.69
SLF1-205ENST00000493934 SIGLEC1Q9BZZ2 1709 aa4.49□□□□□ -1.69
SLF1-205ENST00000493934 PTPRKQ15262 1439 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 SCAPERQ9BY12 1400 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 CAMSAP1Q5T5Y3 1602 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 CSB-PGBD3P0DP91 1061 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 NDUFV2P19404 249 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 ADH6P28332 368 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 POU4F2Q12837 409 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 WDR44Q5JSH3 913 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 EFCAB2Q5VUJ9 269 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 NBPF10Q6P3W6 841 aaKnown RBP4.48□□□□□ -1.69
SLF1-205ENST00000493934 PGBD3Q8N328 593 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 NBPF15Q8N660 670 aa4.48□□□□□ -1.69
SLF1-205ENST00000493934 CCER1Q8TC90 406 aaPredicted RBP4.48□□□□□ -1.69
SLF1-205ENST00000493934 C9orf84Q5VXU9 1444 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 ZMYM4Q5VZL5 1548 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 HECW1Q76N89 1606 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 MOXD2PA6NHM9 499 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 PDIA4P13667 645 aaKnown RBP4.47□□□□□ -1.69
SLF1-205ENST00000493934 TAS1R3Q7RTX0 852 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 AFAP1Q8N556 730 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 NLRP3Q96P20 1036 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 ARHGAP9Q9BRR9 750 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 GPAMQ9HCL2 828 aa4.47□□□□□ -1.69
SLF1-205ENST00000493934 ZMYM3Q14202 1370 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 C9orf172C9J069 976 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 CFAP99D6REC4 459 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 SSTR3P32745 418 aaPredicted RBP4.46□□□□□ -1.7
SLF1-205ENST00000493934 RAB15P59190 212 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 TRIM28Q13263 835 aaKnown RBP4.46□□□□□ -1.7
SLF1-205ENST00000493934 EFHC2Q5JST6 749 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 ZBTB33Q86T24 672 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 PROSER2Q86WR7 435 aaPredicted RBP4.46□□□□□ -1.7
SLF1-205ENST00000493934 SPIRE2Q8WWL2 714 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 TSC1Q92574 1164 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 TP53INP1Q96A56 240 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 BEGAINQ9BUH8 593 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 TMPRSS4Q9NRS4 437 aa4.46□□□□□ -1.7
SLF1-205ENST00000493934 C3P01024 1663 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 ATP5J2-PTCD1G3V325 749 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 WASLO00401 505 aaPredicted RBP4.45□□□□□ -1.7
SLF1-205ENST00000493934 SKIV2LQ15477 1246 aaKnown RBP4.45□□□□□ -1.7
SLF1-205ENST00000493934 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 TXNRD3Q86VQ6 643 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 PROCA1Q8NCQ7 364 aaPredicted RBP4.45□□□□□ -1.7
SLF1-205ENST00000493934 ABHD17AQ96GS6 310 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 POM121Q96HA1 1249 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 ZBTB3Q9H5J0 574 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 POLR3EQ9NVU0 708 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 ZNF777Q9ULD5 760 aaPredicted RBP4.45□□□□□ -1.7
SLF1-205ENST00000493934 PLCH2O75038 1416 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 NPATQ14207 1427 aa4.45□□□□□ -1.7
SLF1-205ENST00000493934 CFAP74Q9C0B2 1584 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 SHANK2Q9UPX8 1470 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 ZBTB7CA1YPR0 619 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 RAD21O60216 631 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 NPM2Q86SE8 214 aaKnown RBP4.44□□□□□ -1.7
SLF1-205ENST00000493934 ANKLE2Q86XL3 938 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 CPS1P31327 1500 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 CNTLNQ9NXG0 1405 aa4.44□□□□□ -1.7
SLF1-205ENST00000493934 PLA2R1Q13018 1463 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 A0A1B0GTH6 734 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 SPATA31C2B4DYI2 1134 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 C2CD2LO14523 706 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 LILRA1O75019 489 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 SSTR4P31391 388 aa4.43□□□□□ -1.7
SLF1-205ENST00000493934 KDF1Q8NAX2 398 aaPredicted RBP4.43□□□□□ -1.7
SLF1-205ENST00000493934 CCDC97Q96F63 343 aaPredicted RBP4.43□□□□□ -1.7
SLF1-205ENST00000493934 AVENQ9NQS1 362 aaPredicted RBP4.43□□□□□ -1.7
SLF1-205ENST00000493934 TCOF1Q13428 1488 aaKnown RBP4.43□□□□□ -1.7
SLF1-205ENST00000493934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.42□□□□□ -1.7
SLF1-205ENST00000493934 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
SLF1-205ENST00000493934 GJA5P36382 358 aa4.42□□□□□ -1.7
SLF1-205ENST00000493934 CLK2P49760 499 aaKnown RBP4.42□□□□□ -1.7
SLF1-205ENST00000493934 GP2P55259 537 aaKnown RBP4.42□□□□□ -1.7
SLF1-205ENST00000493934 NRG1Q02297 640 aaPredicted RBP4.42□□□□□ -1.7
SLF1-205ENST00000493934 MBTPS1Q14703 1052 aa4.42□□□□□ -1.7
SLF1-205ENST00000493934 OAS3Q9Y6K5 1087 aaKnown RBP4.42□□□□□ -1.7
SLF1-205ENST00000493934 AGLP35573 1532 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms