RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 CNBD1Q8NA66 436 aa10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 KLRG1Q96E93 195 aa10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 KCNQ3O43525 872 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 C21orf2O43822 256 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 ST5P78524 1137 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 HTRA3P83110 453 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 DZIP3Q86Y13 1208 aaKnown RBP10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 CCDC24Q8N4L8 307 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 JMYQ8N9B5 988 aa10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
SEMA3F-209ENST00000493743 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 PPP2R1AP30153 589 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 STYK1Q6J9G0 422 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 USP16Q9Y5T5 823 aa10.42□□□□□ -0.74
SEMA3F-209ENST00000493743 SNRPA1P09661 255 aaKnown RBP10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 SRGNP10124 158 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 SOGA3Q5TF21 947 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 CLEC4GQ6UXB4 293 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 MCM10Q7L590 875 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 MASTLQ96GX5 879 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 ZNF652Q9Y2D9 606 aa10.41□□□□□ -0.74
SEMA3F-209ENST00000493743 PRAMEF22A3QJZ6 481 aa10.4□□□□□ -0.74
SEMA3F-209ENST00000493743 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
SEMA3F-209ENST00000493743 PIP4K2AP48426 406 aaPredicted RBP10.4□□□□□ -0.74
SEMA3F-209ENST00000493743 PRPF40BQ6NWY9 871 aaKnown RBP10.4□□□□□ -0.74
SEMA3F-209ENST00000493743 NBPF5PQ86XG9 351 aaPredicted RBP10.4□□□□□ -0.74
SEMA3F-209ENST00000493743 POTECB2RU33 542 aa10.39□□□□□ -0.75
SEMA3F-209ENST00000493743 RGL2O15211 777 aa10.39□□□□□ -0.75
SEMA3F-209ENST00000493743 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
SEMA3F-209ENST00000493743 DCTN1Q14203 1278 aa10.38□□□□□ -0.75
SEMA3F-209ENST00000493743 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
SEMA3F-209ENST00000493743 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
SEMA3F-209ENST00000493743 ANKRD36CQ5JPF3 1778 aa10.38□□□□□ -0.75
SEMA3F-209ENST00000493743 NEFMP07197 916 aa10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 NPR1P16066 1061 aa10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 CCDC93Q567U6 631 aa10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 TPTE2Q6XPS3 522 aa10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 NIP7Q9Y221 180 aaKnown RBP eCLIP10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 ADAMTSL1Q8N6G6 1762 aa10.37□□□□□ -0.75
SEMA3F-209ENST00000493743 KLRG2A4D1S0 409 aaPredicted RBP10.36□□□□□ -0.75
SEMA3F-209ENST00000493743 DDNO94850 711 aaPredicted RBP10.36□□□□□ -0.75
SEMA3F-209ENST00000493743 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
SEMA3F-209ENST00000493743 LAMB2P55268 1798 aa10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 IQCA1LA6NCM1 817 aa10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 FAM177BA6PVY3 158 aa10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 FKBP4Q02790 459 aaKnown RBP eCLIP10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 PNISRQ8TF01 805 aaKnown RBP10.35□□□□□ -0.75
SEMA3F-209ENST00000493743 GTF2E1P29083 439 aaPredicted RBP10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 ALDH1B1P30837 517 aa10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 HLFQ16534 295 aa10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 COL13A1Q5TAT6 717 aaPredicted RBP10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 NYXQ9GZU5 481 aa10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 MIS18AQ9NYP9 233 aa10.34□□□□□ -0.75
SEMA3F-209ENST00000493743 RIC1Q4ADV7 1423 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 HSPA1AP0DMV8 641 aaKnown RBP10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 HSPA1BP0DMV9 641 aaKnown RBP10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 ABCC12Q96J65 1359 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 IBTKQ9P2D0 1353 aaPredicted RBP10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 TRPM7Q96QT4 1865 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
SEMA3F-209ENST00000493743 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 KIF6Q6ZMV9 814 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 NGEFQ8N5V2 710 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 PNNQ9H307 717 aaKnown RBP10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 TAF1DQ9H5J8 278 aaPredicted RBP10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 ZNF541Q9H0D2 1346 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
SEMA3F-209ENST00000493743 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 CRY2Q49AN0 593 aa10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 OLFM4Q6UX06 510 aa10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 SYNE4Q8N205 404 aa10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 RRP7AQ9Y3A4 280 aaKnown RBP10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
SEMA3F-209ENST00000493743 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 MYL6BP14649 208 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms