RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ELOA3DA6NLF2 546 aaPredicted RBP9.74□□□□□ -0.85
SMC4-223ENST00000493695 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
SMC4-223ENST00000493695 ATP1A2P50993 1020 aa9.74□□□□□ -0.85
SMC4-223ENST00000493695 LAMC2Q13753 1193 aa9.74□□□□□ -0.85
SMC4-223ENST00000493695 ELOA3BQ3SY89 546 aa9.74□□□□□ -0.85
SMC4-223ENST00000493695 ELOA3Q8NG57 546 aa9.74□□□□□ -0.85
SMC4-223ENST00000493695 NEUROD1Q13562 356 aa9.73□□□□□ -0.85
SMC4-223ENST00000493695 SH3PXD2AQ5TCZ1 1133 aa9.73□□□□□ -0.85
SMC4-223ENST00000493695 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
SMC4-223ENST00000493695 HCN4Q9Y3Q4 1203 aa9.73□□□□□ -0.85
SMC4-223ENST00000493695 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 EFSO43281 561 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 SFSWAPQ12872 951 aaKnown RBP9.72□□□□□ -0.85
SMC4-223ENST00000493695 DOC2BQ14184 412 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 RAB44Q7Z6P3 723 aaPredicted RBP9.72□□□□□ -0.85
SMC4-223ENST00000493695 CEP63Q96MT8 703 aa9.72□□□□□ -0.85
SMC4-223ENST00000493695 SPDYE3A6NKU9 549 aa9.71□□□□□ -0.86
SMC4-223ENST00000493695 PRRT3Q5FWE3 981 aa9.71□□□□□ -0.86
SMC4-223ENST00000493695 XP32Q5T750 250 aa9.71□□□□□ -0.86
SMC4-223ENST00000493695 TRIM11Q96F44 468 aa9.71□□□□□ -0.86
SMC4-223ENST00000493695 ZNF594Q96JF6 807 aaPredicted RBP9.71□□□□□ -0.86
SMC4-223ENST00000493695 TSPAN10Q9H1Z9 355 aaPredicted RBP9.71□□□□□ -0.86
SMC4-223ENST00000493695 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 EML1O00423 815 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 EPHA4P54764 986 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 HSH2DQ96JZ2 352 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 KIAA1024Q9UPX6 916 aa9.7□□□□□ -0.86
SMC4-223ENST00000493695 M0R082 166 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 PSMA6P60900 246 aaKnown RBP9.69□□□□□ -0.86
SMC4-223ENST00000493695 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 ZNF417Q8TAU3 575 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 ZNF587Q96SQ5 575 aaPredicted RBP9.69□□□□□ -0.86
SMC4-223ENST00000493695 SLC30A3Q99726 388 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
SMC4-223ENST00000493695 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
SMC4-223ENST00000493695 APBA3O96018 575 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 GATA4P43694 442 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 CLDN10P78369 228 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 SPEM2Q0P670 501 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 FLIIQ13045 1269 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
SMC4-223ENST00000493695 PHACTR1Q9C0D0 580 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 SEMA6BQ9H3T3 888 aa9.68□□□□□ -0.86
SMC4-223ENST00000493695 ATP9BO43861 1147 aa9.67□□□□□ -0.86
SMC4-223ENST00000493695 PPP1R12BO60237 982 aaPredicted RBP9.67□□□□□ -0.86
SMC4-223ENST00000493695 TSEN2Q8NCE0 465 aaKnown RBP9.67□□□□□ -0.86
SMC4-223ENST00000493695 GPC6Q9Y625 555 aaPredicted RBP9.67□□□□□ -0.86
SMC4-223ENST00000493695 PALM3A6NDB9 673 aaPredicted RBP9.66□□□□□ -0.86
SMC4-223ENST00000493695 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
SMC4-223ENST00000493695 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
SMC4-223ENST00000493695 SIN3BO75182 1162 aa9.66□□□□□ -0.86
SMC4-223ENST00000493695 PLEKHM2Q8IWE5 1019 aa9.66□□□□□ -0.86
SMC4-223ENST00000493695 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
SMC4-223ENST00000493695 NGLY1Q96IV0 654 aa9.66□□□□□ -0.86
SMC4-223ENST00000493695 ADH7P40394 386 aa9.65□□□□□ -0.86
SMC4-223ENST00000493695 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
SMC4-223ENST00000493695 BHMTQ93088 406 aa9.65□□□□□ -0.86
SMC4-223ENST00000493695 TRIM28Q13263 835 aaKnown RBP9.64□□□□□ -0.87
SMC4-223ENST00000493695 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
SMC4-223ENST00000493695 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
SMC4-223ENST00000493695 RASA1P20936 1047 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 C1orf53Q5VUE5 145 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 Q8N3U1 123 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 ZNF280CQ8ND82 737 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
SMC4-223ENST00000493695 ALBP02768 609 aa9.62□□□□□ -0.87
SMC4-223ENST00000493695 HINFPQ9BQA5 517 aa9.62□□□□□ -0.87
SMC4-223ENST00000493695 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
SMC4-223ENST00000493695 ADARB2-AS1A8MUL3 147 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 C7orf43Q8WVR3 580 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 SCG3Q8WXD2 468 aaKnown RBP9.61□□□□□ -0.87
SMC4-223ENST00000493695 TNFRSF25Q93038 417 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
SMC4-223ENST00000493695 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
SMC4-223ENST00000493695 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
SMC4-223ENST00000493695 LGR5O75473 907 aa9.59□□□□□ -0.87
SMC4-223ENST00000493695 TYRO3Q06418 890 aa9.59□□□□□ -0.87
SMC4-223ENST00000493695 GRIK4Q16099 956 aa9.59□□□□□ -0.87
SMC4-223ENST00000493695 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
SMC4-223ENST00000493695 M0R2N6 131 aa9.58□□□□□ -0.88
SMC4-223ENST00000493695 LILRB5O75023 590 aa9.58□□□□□ -0.88
SMC4-223ENST00000493695 HIRAP54198 1017 aaPredicted RBP9.58□□□□□ -0.88
SMC4-223ENST00000493695 LARP1Q6PKG0 1096 aaKnown RBP9.58□□□□□ -0.88
SMC4-223ENST00000493695 SIX5Q8N196 739 aa9.58□□□□□ -0.88
SMC4-223ENST00000493695 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
SMC4-223ENST00000493695 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
SMC4-223ENST00000493695 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
SMC4-223ENST00000493695 SEC13P55735 322 aa9.57□□□□□ -0.88
SMC4-223ENST00000493695 HIF1AQ16665 826 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms