RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PI4KAP2A4QPH2 592 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 ANKRD18AQ8IVF6 992 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 PI4KAP1Q8N8J0 262 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 TRIM44Q96DX7 344 aaPredicted RBP7.61□□□□□ -1.19
NF1-215ENST00000493220 RBM25P49756 843 aaKnown RBP7.61□□□□□ -1.19
NF1-215ENST00000493220 AACSQ86V21 672 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 NACAP1Q9BZK3 213 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 C1orf115Q9H7X2 142 aa7.61□□□□□ -1.19
NF1-215ENST00000493220 ADGRB2O60241 1585 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 CHL1O00533 1208 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 CDC45O75419 566 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 SSH2Q76I76 1423 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 PNPLA6Q8IY17 1366 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 CNBD1Q8NA66 436 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 CPDO75976 1380 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 FAM161AQ3B820 660 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 ANKRD2Q9GZV1 360 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 LGR6Q9HBX8 967 aa7.6□□□□□ -1.19
NF1-215ENST00000493220 RBM5P52756 815 aaKnown RBP eCLIP7.6□□□□□ -1.19
NF1-215ENST00000493220 AKAP17AQ02040 695 aaKnown RBP7.6□□□□□ -1.19
NF1-215ENST00000493220 C8orf58Q8NAV2 365 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 IFT172Q9UG01 1749 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 LINS1Q8NG48 757 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 EYA3Q99504 573 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 SPATA31A1Q5TZJ5 1347 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 SPTY2D1Q68D10 685 aaPredicted RBP7.59□□□□□ -1.19
NF1-215ENST00000493220 CPLX2Q6PUV4 134 aaKnown RBP7.59□□□□□ -1.19
NF1-215ENST00000493220 LNPKQ9C0E8 428 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
NF1-215ENST00000493220 ANO2Q9NQ90 1003 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 MYO5BQ9ULV0 1848 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 TRIM37O94972 964 aa7.59□□□□□ -1.19
NF1-215ENST00000493220 EIF4A1P60842 406 aaKnown RBP7.59□□□□□ -1.19
NF1-215ENST00000493220 F6X3S4 739 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 KIF20BQ96Q89 1820 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 GRM8O00222 908 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 DEKP35659 375 aaKnown RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 TTF1Q15361 905 aaPredicted RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 ZGPATQ8N5A5 531 aaKnown RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 LRRFIP2Q9Y608 721 aaKnown RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 PSMA5P28066 241 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 PDE6BP35913 854 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 GSTO1P78417 241 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 SART3Q15020 963 aaKnown RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 SUPT20HQ8NEM7 779 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 METTL22Q9BUU2 404 aaPredicted RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 SPATA31A5Q5VU36 1347 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 SPATA31A7Q8IWB4 1347 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 UQCRFS1P1P0C7P4 283 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 UBE3BQ7Z3V4 1068 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 ZNF804AQ7Z570 1209 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 RAI14Q9P0K7 980 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 LOC102724428A0A0B4J2F2 783 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 TRIM27P14373 513 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 SIK1P57059 783 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
NF1-215ENST00000493220 TRIM35Q9UPQ4 493 aa7.58□□□□□ -1.2
NF1-215ENST00000493220 C6orf229H3BNL8 230 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 IRS4O14654 1257 aaPredicted RBP7.57□□□□□ -1.2
NF1-215ENST00000493220 VAMP4O75379 141 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 LRP2BPQ9P2M1 347 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 H0YIN7 160 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 PTMAP06454 111 aaKnown RBP7.57□□□□□ -1.2
NF1-215ENST00000493220 CHD1LQ86WJ1 897 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 NLGN1Q8N2Q7 840 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
NF1-215ENST00000493220 ZNF287Q9HBT7 754 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 HDAC9Q9UKV0 1011 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 DNAJC10Q8IXB1 793 aa7.57□□□□□ -1.2
NF1-215ENST00000493220 GOLGA6L4A6NEF3 574 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 ALDH1B1P30837 517 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 CSPP1Q1MSJ5 1256 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 PDZRN3Q9UPQ7 1066 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 PALLDQ8WX93 1383 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 LDHCP07864 332 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 SOGA3Q5TF21 947 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 DZIP1Q86YF9 867 aaKnown RBP7.56□□□□□ -1.2
NF1-215ENST00000493220 FKBP4Q02790 459 aaKnown RBP eCLIP7.56□□□□□ -1.2
NF1-215ENST00000493220 MAP3K12Q12852 859 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 IL17REQ8NFR9 667 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 PDE8AO60658 829 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 IL6STP40189 918 aaPredicted RBP7.56□□□□□ -1.2
NF1-215ENST00000493220 CTNNA3Q9UI47 895 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 NWD1Q149M9 1564 aa7.56□□□□□ -1.2
NF1-215ENST00000493220 IQSEC2Q5JU85 1478 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 SH3TC1Q8TE82 1336 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 PATL2C9JE40 543 aaKnown RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 MYO1BO43795 1136 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 GLRX3O76003 335 aaKnown RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 IL15P40933 162 aaPredicted RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 ZNF496Q96IT1 587 aaPredicted RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 CCDC34Q96HJ3 373 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 FMN2Q9NZ56 1722 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 CRKLP46109 303 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms