RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 RNF123Q5XPI4 1314 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 KDM3BQ7LBC6 1761 aa6.69□□□□□ -1.34
NEK4-205ENST00000493199 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
NEK4-205ENST00000493199 PI4KAP2A4QPH2 592 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 A1BGP04217 495 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 TPTE2Q6XPS3 522 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 GIGYF2Q6Y7W6 1299 aaKnown RBP6.68□□□□□ -1.34
NEK4-205ENST00000493199 PI4KAP1Q8N8J0 262 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 CCDC191Q8NCU4 936 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 XAGE3Q8WTP9 111 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 SETDB2Q96T68 719 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
NEK4-205ENST00000493199 MAP3K2Q9Y2U5 619 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 MAP3K15Q6ZN16 1313 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 ZNF831Q5JPB2 1677 aa6.68□□□□□ -1.34
NEK4-205ENST00000493199 NUP188Q5SRE5 1749 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 SHANK3Q9BYB0 1731 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 SIPA1L3O60292 1781 aaPredicted RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 UBTFL1P0CB47 393 aaPredicted RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 TRIM27P14373 513 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 EIF5P55010 431 aaKnown RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 MVPQ14764 893 aaKnown RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 HSP90AB4PQ58FF6 505 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 INTS3Q68E01 1043 aaKnown RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 CLUAP1Q96AJ1 413 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 RWDD1Q9H446 243 aaPredicted RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 CWC25Q9NXE8 425 aaPredicted RBP6.67□□□□□ -1.34
NEK4-205ENST00000493199 NARFQ9UHQ1 456 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 PDZRN3Q9UPQ7 1066 aa6.67□□□□□ -1.34
NEK4-205ENST00000493199 TCERG1O14776 1098 aaKnown RBP6.66□□□□□ -1.34
NEK4-205ENST00000493199 GNAI2P04899 355 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 YY1P25490 414 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 POLD1P28340 1107 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 TRIM28Q13263 835 aaKnown RBP6.66□□□□□ -1.34
NEK4-205ENST00000493199 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 SLC15A2Q16348 729 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 KRT24Q2M2I5 525 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
NEK4-205ENST00000493199 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 ZBTB1Q9Y2K1 713 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 BTAF1O14981 1849 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 COL15A1P39059 1388 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 KCPQ6ZWJ8 1503 aa6.66□□□□□ -1.34
NEK4-205ENST00000493199 RGPD3A6NKT7 1758 aaPredicted RBP6.65□□□□□ -1.34
NEK4-205ENST00000493199 RGPD4Q7Z3J3 1758 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 UBR2Q8IWV8 1755 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 SBF2Q86WG5 1849 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.65□□□□□ -1.34
NEK4-205ENST00000493199 PHF14O94880 888 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 ST5P78524 1137 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 ITPK1Q13572 414 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 FKBP8Q14318 412 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 PDIA6Q15084 440 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 INTS5Q6P9B9 1019 aaKnown RBP6.65□□□□□ -1.34
NEK4-205ENST00000493199 CCDC136Q96JN2 1154 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 MYD88Q99836 296 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 UTP14AQ9BVJ6 771 aaKnown RBP6.65□□□□□ -1.34
NEK4-205ENST00000493199 ZBTB3Q9H5J0 574 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 PPP4R2Q9NY27 417 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 TRMT112Q9UI30 125 aaKnown RBP6.65□□□□□ -1.34
NEK4-205ENST00000493199 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
NEK4-205ENST00000493199 IBTKQ9P2D0 1353 aaPredicted RBP6.65□□□□□ -1.35
NEK4-205ENST00000493199 PXDNLA1KZ92 1463 aa6.65□□□□□ -1.35
NEK4-205ENST00000493199 PAPPAQ13219 1627 aa6.65□□□□□ -1.35
NEK4-205ENST00000493199 LAMB4A4D0S4 1761 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 PRAMEF22A3QJZ6 481 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 NBPF26B4DH59 902 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 GRM8O00222 908 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 PLIN1O60240 522 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 NBPF10Q6P3W6 841 aaKnown RBP6.64□□□□□ -1.35
NEK4-205ENST00000493199 NBPF5PQ86XG9 351 aaPredicted RBP6.64□□□□□ -1.35
NEK4-205ENST00000493199 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 LINC00116Q8NCU8 138 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 ARHGEF1Q92888 912 aaKnown RBP6.64□□□□□ -1.35
NEK4-205ENST00000493199 NLRP3Q96P20 1036 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 NIP7Q9Y221 180 aaKnown RBP eCLIP6.64□□□□□ -1.35
NEK4-205ENST00000493199 COG6Q9Y2V7 657 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 ABCC4O15439 1325 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 ATP10DQ9P241 1426 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 TOGARAM1Q9Y4F4 1720 aa6.64□□□□□ -1.35
NEK4-205ENST00000493199 EIF5BO60841 1220 aaKnown RBP6.63□□□□□ -1.35
NEK4-205ENST00000493199 PCCAP05165 728 aaPredicted RBP6.63□□□□□ -1.35
NEK4-205ENST00000493199 GCKRQ14397 625 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 CCDC57Q2TAC2 916 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 TAF7LQ5H9L4 462 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 BEND3Q5T5X7 828 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 TMEM57Q8N5G2 664 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 ZBTB38Q8NAP3 1195 aaPredicted RBP6.63□□□□□ -1.35
NEK4-205ENST00000493199 SH3TC1Q8TE82 1336 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 SLC4A9Q96Q91 983 aa6.63□□□□□ -1.35
NEK4-205ENST00000493199 PPP1R1BQ9UD71 204 aaPredicted RBP6.63□□□□□ -1.35
NEK4-205ENST00000493199 LY75O60449 1722 aa6.62□□□□□ -1.35
NEK4-205ENST00000493199 C5P01031 1676 aa6.62□□□□□ -1.35
NEK4-205ENST00000493199 CICQ96RK0 1608 aaPredicted RBP6.62□□□□□ -1.35
NEK4-205ENST00000493199 CARMIL3Q8ND23 1372 aa6.62□□□□□ -1.35
NEK4-205ENST00000493199 USP42Q9H9J4 1324 aaKnown RBP6.62□□□□□ -1.35
NEK4-205ENST00000493199 NEURL1BA8MQ27 555 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms