RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 LRRCC1Q9C099 1032 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 RREB1Q92766 1687 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 MSH5O43196 834 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 ASAP1Q9ULH1 1129 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
SMARCC1-208ENST00000492896 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 SEC24BO95487 1268 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 A1BGP04217 495 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 GCKRQ14397 625 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 VPS72Q15906 364 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 SUCLG2Q96I99 432 aa11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
SMARCC1-208ENST00000492896 NUP98P52948 1817 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 COL15A1P39059 1388 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 CDC45O75419 566 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 STARD3NLO95772 234 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 OTUD7AQ8TE49 926 aaPredicted RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 BCL11AQ9H165 835 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
SMARCC1-208ENST00000492896 MYH3P11055 1940 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 TTLL7Q6ZT98 887 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 AOX1Q06278 1338 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 SALL3Q9BXA9 1300 aa11.29□□□□□ -0.6
SMARCC1-208ENST00000492896 BTAF1O14981 1849 aa11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 MFAP1P55081 439 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 TBC1D32Q96NH3 1257 aa11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-208ENST00000492896 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 A0A0G2JS52 829 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 MX1P20591 662 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 PDE1AP54750 535 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 OS9Q13438 667 aaPredicted RBP11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 KAZALD1Q96I82 304 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 CWC25Q9NXE8 425 aaPredicted RBP11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
SMARCC1-208ENST00000492896 A0A087WZG4 1122 aa11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 MEX3CQ5U5Q3 659 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 USP21Q9UK80 565 aa11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
SMARCC1-208ENST00000492896 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 SDSP20132 328 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 CCDC191Q8NCU4 936 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
SMARCC1-208ENST00000492896 LAMB2P55268 1798 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 H7C1W4 665 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 HSPA1LP34931 641 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 CASP7P55210 303 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 MYT1Q01538 1121 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 EPHA10Q5JZY3 1008 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 ZBTB1Q9Y2K1 713 aa11.24□□□□□ -0.61
SMARCC1-208ENST00000492896 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 TCIRG1Q13488 830 aa11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms