RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 CLASRPQ8N2M8 674 aaKnown RBP19.45■□□□□ 0.7
SEMA4D-220ENST00000492386 C9orf78Q9NZ63 289 aaPredicted RBP19.45■□□□□ 0.7
SEMA4D-220ENST00000492386 GCP02774 474 aa19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 MSNP26038 577 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 ECHDC1Q9NTX5 307 aa19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 LIMCH1Q9UPQ0 1083 aa19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 DIAPH3Q9NSV4 1193 aa19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 NOL7Q9UMY1 257 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 ZNF142P52746 1687 aaPredicted RBP19.44■□□□□ 0.7
SEMA4D-220ENST00000492386 CWF19L2Q2TBE0 894 aaKnown RBP19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 TMEM87AQ8NBN3 555 aa19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 PA2G4Q9UQ80 394 aaKnown RBP19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
SEMA4D-220ENST00000492386 PTH1RQ03431 593 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 RUFY2Q8WXA3 655 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 LARP6Q9BRS8 491 aaKnown RBP19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 CPA1P15085 419 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 TSPY26PQ9H489 355 aa19.42■□□□□ 0.7
SEMA4D-220ENST00000492386 OFD1O75665 1012 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 ZSCAN22P10073 491 aaPredicted RBP19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 CASTP20810 708 aaKnown RBP19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 RNF214Q8ND24 703 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 KCNB2Q92953 911 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 HYPKQ9NX55 129 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 KAZALD1Q96I82 304 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.41■□□□□ 0.7
SEMA4D-220ENST00000492386 UTYO14607 1347 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 LARGE1O95461 756 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 SYT1P21579 422 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 LINS1Q8NG48 757 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 LMTK3Q96Q04 1460 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 STX6O43752 255 aa19.4■□□□□ 0.7
SEMA4D-220ENST00000492386 RGPD5Q99666 1765 aa19.39■□□□□ 0.7
SEMA4D-220ENST00000492386 TRPM3Q9HCF6 1732 aaPredicted RBP19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 GRM8O00222 908 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 ADCK5Q3MIX3 580 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 AACSQ86V21 672 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 EVI5LQ96CN4 794 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 SUCLG2Q96I99 432 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 CNPY2Q9Y2B0 182 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 ZNF500O60304 480 aaPredicted RBP19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 AXIN2Q9Y2T1 843 aa19.39■□□□□ 0.69
SEMA4D-220ENST00000492386 PHF14O94880 888 aa19.38■□□□□ 0.69
SEMA4D-220ENST00000492386 SASH1O94885 1247 aa19.38■□□□□ 0.69
SEMA4D-220ENST00000492386 VPS53Q5VIR6 699 aa19.38■□□□□ 0.69
SEMA4D-220ENST00000492386 ZSWIM6Q9HCJ5 1215 aa19.38■□□□□ 0.69
SEMA4D-220ENST00000492386 SMC3Q9UQE7 1217 aa19.38■□□□□ 0.69
SEMA4D-220ENST00000492386 PDIA6Q15084 440 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 JAKMIP1Q96N16 626 aaKnown RBP19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 ZKSCAN5Q9Y2L8 839 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 F13A1P00488 732 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 BICC1Q9H694 974 aaKnown RBP19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 PDRG1Q9NUG6 133 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 CCDC171Q6TFL3 1326 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 C5P01031 1676 aa19.37■□□□□ 0.69
SEMA4D-220ENST00000492386 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-220ENST00000492386 TPM2P07951 284 aa19.36■□□□□ 0.69
SEMA4D-220ENST00000492386 CCDC39Q9UFE4 941 aa19.36■□□□□ 0.69
SEMA4D-220ENST00000492386 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-220ENST00000492386 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
SEMA4D-220ENST00000492386 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
SEMA4D-220ENST00000492386 ST3GAL1Q11201 340 aa19.35■□□□□ 0.69
SEMA4D-220ENST00000492386 CCDC83Q8IWF9 413 aa19.35■□□□□ 0.69
SEMA4D-220ENST00000492386 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 MCM5P33992 734 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 ZSCAN31Q96LW9 406 aaPredicted RBP19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 SNRKQ9NRH2 765 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 GJB2P29033 226 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 UBE2HP62256 183 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 G3BP1Q13283 466 aaKnown RBP eCLIP19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 SH2B1Q9NRF2 756 aaPredicted RBP19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 RBM8AQ9Y5S9 174 aaKnown RBP19.34■□□□□ 0.69
SEMA4D-220ENST00000492386 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.69
SEMA4D-220ENST00000492386 MAP4K1Q92918 833 aa19.33■□□□□ 0.69
SEMA4D-220ENST00000492386 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.69
SEMA4D-220ENST00000492386 TLR7Q9NYK1 1049 aaKnown RBP19.33■□□□□ 0.69
SEMA4D-220ENST00000492386 MTMR6Q9Y217 621 aa19.33■□□□□ 0.69
SEMA4D-220ENST00000492386 CREB3L3Q68CJ9 461 aa19.33■□□□□ 0.68
SEMA4D-220ENST00000492386 ATP6V1DQ9Y5K8 247 aa19.33■□□□□ 0.68
SEMA4D-220ENST00000492386 MRC1P22897 1456 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms