RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
NCK1-211ENST00000491539 SNED1Q8TER0 1413 aa18.69■□□□□ 0.58
NCK1-211ENST00000491539 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
NCK1-211ENST00000491539 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
NCK1-211ENST00000491539 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
NCK1-211ENST00000491539 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
NCK1-211ENST00000491539 CNBD1Q8NA66 436 aa18.68■□□□□ 0.58
NCK1-211ENST00000491539 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
NCK1-211ENST00000491539 CEMIPQ8WUJ3 1361 aa18.68■□□□□ 0.58
NCK1-211ENST00000491539 KCNQ3O43525 872 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 A1BGP04217 495 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 PDE6BP35913 854 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 LAMB2P55268 1798 aa18.67■□□□□ 0.58
NCK1-211ENST00000491539 A0A087WZG4 1122 aa18.66■□□□□ 0.58
NCK1-211ENST00000491539 PRAMEF22A3QJZ6 481 aa18.66■□□□□ 0.58
NCK1-211ENST00000491539 STARD3NLO95772 234 aa18.66■□□□□ 0.58
NCK1-211ENST00000491539 SRGNP10124 158 aa18.66■□□□□ 0.58
NCK1-211ENST00000491539 DPY19L2Q6NUT2 758 aa18.66■□□□□ 0.58
NCK1-211ENST00000491539 IL6STP40189 918 aaPredicted RBP18.65■□□□□ 0.58
NCK1-211ENST00000491539 STYK1Q6J9G0 422 aa18.64■□□□□ 0.57
NCK1-211ENST00000491539 SLC51AQ86UW1 340 aa18.64■□□□□ 0.57
NCK1-211ENST00000491539 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
NCK1-211ENST00000491539 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
NCK1-211ENST00000491539 C7orf43Q8WVR3 580 aa18.63■□□□□ 0.57
NCK1-211ENST00000491539 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
NCK1-211ENST00000491539 TAF1DQ9H5J8 278 aaPredicted RBP18.63■□□□□ 0.57
NCK1-211ENST00000491539 VEGFBP49765 207 aa18.62■□□□□ 0.57
NCK1-211ENST00000491539 TEFQ10587 303 aa18.62■□□□□ 0.57
NCK1-211ENST00000491539 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
NCK1-211ENST00000491539 ANKRD36CQ5JPF3 1778 aa18.62■□□□□ 0.57
NCK1-211ENST00000491539 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 ST5P78524 1137 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
NCK1-211ENST00000491539 CNKSR1Q969H4 720 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 MASTLQ96GX5 879 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 ZNF277Q9NRM2 450 aaPredicted RBP18.61■□□□□ 0.57
NCK1-211ENST00000491539 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
NCK1-211ENST00000491539 RNF123Q5XPI4 1314 aa18.6■□□□□ 0.57
NCK1-211ENST00000491539 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
NCK1-211ENST00000491539 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
NCK1-211ENST00000491539 FMNL2Q96PY5 1086 aa18.6■□□□□ 0.57
NCK1-211ENST00000491539 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
NCK1-211ENST00000491539 CCDC93Q567U6 631 aa18.59■□□□□ 0.57
NCK1-211ENST00000491539 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
NCK1-211ENST00000491539 NPHP1O15259 732 aa18.58■□□□□ 0.56
NCK1-211ENST00000491539 U2AF1L5P0DN76 240 aaPredicted RBP18.58■□□□□ 0.56
NCK1-211ENST00000491539 U2AF1Q01081 240 aaKnown RBP eCLIP18.58■□□□□ 0.56
NCK1-211ENST00000491539 USP16Q9Y5T5 823 aa18.58■□□□□ 0.56
NCK1-211ENST00000491539 IQCA1LA6NCM1 817 aa18.57■□□□□ 0.56
NCK1-211ENST00000491539 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
NCK1-211ENST00000491539 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
NCK1-211ENST00000491539 TAF1P21675 1872 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 TMEM88BA6NKF7 163 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 LBX1P52954 281 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
NCK1-211ENST00000491539 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
NCK1-211ENST00000491539 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
NCK1-211ENST00000491539 HSPA8P11142 646 aaKnown RBP18.55■□□□□ 0.56
NCK1-211ENST00000491539 FMR1Q06787 632 aaKnown RBP eCLIP18.55■□□□□ 0.56
NCK1-211ENST00000491539 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
NCK1-211ENST00000491539 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
NCK1-211ENST00000491539 WBP1LQ9NX94 342 aa18.55■□□□□ 0.56
NCK1-211ENST00000491539 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
NCK1-211ENST00000491539 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
NCK1-211ENST00000491539 EPHX2P34913 555 aa18.54■□□□□ 0.56
NCK1-211ENST00000491539 CTCFP49711 727 aaPredicted RBP18.54■□□□□ 0.56
NCK1-211ENST00000491539 HACL1Q9UJ83 578 aa18.54■□□□□ 0.56
NCK1-211ENST00000491539 KLRG2A4D1S0 409 aaPredicted RBP18.53■□□□□ 0.56
NCK1-211ENST00000491539 RASSF10A6NK89 507 aa18.53■□□□□ 0.56
NCK1-211ENST00000491539 NPR1P16066 1061 aa18.53■□□□□ 0.56
NCK1-211ENST00000491539 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
NCK1-211ENST00000491539 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
NCK1-211ENST00000491539 HLFQ16534 295 aa18.52■□□□□ 0.56
NCK1-211ENST00000491539 MCM10Q7L590 875 aa18.52■□□□□ 0.56
NCK1-211ENST00000491539 AIDAQ96BJ3 306 aa18.52■□□□□ 0.56
NCK1-211ENST00000491539 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
NCK1-211ENST00000491539 CLEC11AQ9Y240 323 aa18.51■□□□□ 0.55
NCK1-211ENST00000491539 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
NCK1-211ENST00000491539 LRRC37AA6NMS7 1700 aa18.51■□□□□ 0.55
NCK1-211ENST00000491539 FZD9O00144 591 aa18.5■□□□□ 0.55
NCK1-211ENST00000491539 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
NCK1-211ENST00000491539 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
NCK1-211ENST00000491539 RALBP1Q15311 655 aa18.49■□□□□ 0.55
NCK1-211ENST00000491539 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
NCK1-211ENST00000491539 ABHD8Q96I13 439 aa18.49■□□□□ 0.55
NCK1-211ENST00000491539 TNRC18O15417 2968 aaPredicted RBP18.49■□□□□ 0.55
NCK1-211ENST00000491539 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
NCK1-211ENST00000491539 DUOX1Q9NRD9 1551 aa18.48■□□□□ 0.55
NCK1-211ENST00000491539 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
NCK1-211ENST00000491539 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
NCK1-211ENST00000491539 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
NCK1-211ENST00000491539 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
NCK1-211ENST00000491539 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms