RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
CNOT4-210ENST00000491203 RGS12O14924 1447 aa11.18□□□□□ -0.62
CNOT4-210ENST00000491203 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 MAP3K7O43318 606 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 OSBPP22059 807 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 C1orf141Q5JVX7 400 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-210ENST00000491203 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
CNOT4-210ENST00000491203 GOLGA8CPA6NN73 597 aa11.16□□□□□ -0.62
CNOT4-210ENST00000491203 NFE2L2Q16236 605 aa11.16□□□□□ -0.62
CNOT4-210ENST00000491203 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
CNOT4-210ENST00000491203 IFNL2Q8IZJ0 200 aa11.16□□□□□ -0.62
CNOT4-210ENST00000491203 APAF1O14727 1248 aa11.15□□□□□ -0.62
CNOT4-210ENST00000491203 CYP27B1O15528 508 aa11.15□□□□□ -0.62
CNOT4-210ENST00000491203 HSP90AB1P08238 724 aaKnown RBP11.15□□□□□ -0.62
CNOT4-210ENST00000491203 PHKG2P15735 406 aa11.15□□□□□ -0.62
CNOT4-210ENST00000491203 TMPOP42166 694 aaKnown RBP11.15□□□□□ -0.62
CNOT4-210ENST00000491203 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
CNOT4-210ENST00000491203 MARCH10Q8NA82 808 aaPredicted RBP11.15□□□□□ -0.62
CNOT4-210ENST00000491203 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
CNOT4-210ENST00000491203 RRP7AQ9Y3A4 280 aaKnown RBP11.15□□□□□ -0.62
CNOT4-210ENST00000491203 MAP3K5Q99683 1374 aa11.15□□□□□ -0.63
CNOT4-210ENST00000491203 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 RIPK4P57078 832 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
CNOT4-210ENST00000491203 BCAMP50895 628 aa11.13□□□□□ -0.63
CNOT4-210ENST00000491203 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
CNOT4-210ENST00000491203 RTF1Q92541 710 aaKnown RBP11.13□□□□□ -0.63
CNOT4-210ENST00000491203 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
CNOT4-210ENST00000491203 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
CNOT4-210ENST00000491203 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
CNOT4-210ENST00000491203 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
CNOT4-210ENST00000491203 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
CNOT4-210ENST00000491203 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
CNOT4-210ENST00000491203 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
CNOT4-210ENST00000491203 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
CNOT4-210ENST00000491203 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
CNOT4-210ENST00000491203 SALL2Q9Y467 1007 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-210ENST00000491203 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
CNOT4-210ENST00000491203 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
CNOT4-210ENST00000491203 MCM10Q7L590 875 aa11.1□□□□□ -0.63
CNOT4-210ENST00000491203 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
CNOT4-210ENST00000491203 ANKK1Q8NFD2 765 aa11.1□□□□□ -0.63
CNOT4-210ENST00000491203 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
CNOT4-210ENST00000491203 BCL9O00512 1426 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
CNOT4-210ENST00000491203 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 CABP4P57796 275 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
CNOT4-210ENST00000491203 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 CCDC27Q2M243 656 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
CNOT4-210ENST00000491203 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-210ENST00000491203 PRSS12P56730 875 aa11.08□□□□□ -0.64
CNOT4-210ENST00000491203 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
CNOT4-210ENST00000491203 TEFQ10587 303 aa11.08□□□□□ -0.64
CNOT4-210ENST00000491203 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-210ENST00000491203 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
CNOT4-210ENST00000491203 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
CNOT4-210ENST00000491203 DLG5Q8TDM6 1919 aa11.07□□□□□ -0.64
CNOT4-210ENST00000491203 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
CNOT4-210ENST00000491203 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
CNOT4-210ENST00000491203 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
CNOT4-210ENST00000491203 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
CNOT4-210ENST00000491203 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-210ENST00000491203 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
CNOT4-210ENST00000491203 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 ADAMTS7Q9UKP4 1686 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 SMAPO00193 183 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 MRC1P22897 1456 aa11.06□□□□□ -0.64
CNOT4-210ENST00000491203 KCNQ2O43526 872 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 TRIM37O94972 964 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 TAF7Q15545 349 aaPredicted RBP11.05□□□□□ -0.64
CNOT4-210ENST00000491203 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 PIGBQ92521 554 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 KAT6BQ8WYB5 2073 aa11.05□□□□□ -0.64
CNOT4-210ENST00000491203 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
CNOT4-210ENST00000491203 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
CNOT4-210ENST00000491203 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
CNOT4-210ENST00000491203 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
CNOT4-210ENST00000491203 BTBD11A6QL63 1104 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 PTF1AQ7RTS3 328 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 PACS2Q86VP3 889 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 IFT57Q9NWB7 429 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 IL16Q14005 1332 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 ZBED9Q6R2W3 1325 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
CNOT4-210ENST00000491203 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.64
CNOT4-210ENST00000491203 GNAI1P63096 354 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms