RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 SLC4A9Q96Q91 983 aa11.82□□□□□ -0.52
USP34-218ENST00000490552 C9orf78Q9NZ63 289 aaPredicted RBP11.82□□□□□ -0.52
USP34-218ENST00000490552 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
USP34-218ENST00000490552 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
USP34-218ENST00000490552 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
USP34-218ENST00000490552 TJP1Q07157 1748 aa11.81□□□□□ -0.52
USP34-218ENST00000490552 UTYO14607 1347 aa11.81□□□□□ -0.52
USP34-218ENST00000490552 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
USP34-218ENST00000490552 NEURL1BA8MQ27 555 aa11.8□□□□□ -0.52
USP34-218ENST00000490552 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
USP34-218ENST00000490552 GRM8O00222 908 aa11.8□□□□□ -0.52
USP34-218ENST00000490552 PIAS4Q8N2W9 510 aaPredicted RBP11.8□□□□□ -0.52
USP34-218ENST00000490552 A0A087WZG4 1122 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 RGL2O15211 777 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 GCKRQ14397 625 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 MYD88Q99836 296 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 C1orf115Q9H7X2 142 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 MAP3K15Q6ZN16 1313 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 DCTPP1Q9H773 170 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
USP34-218ENST00000490552 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
USP34-218ENST00000490552 BTAF1O14981 1849 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 COL15A1P39059 1388 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
USP34-218ENST00000490552 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 ITPK1Q13572 414 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
USP34-218ENST00000490552 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
USP34-218ENST00000490552 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 ZNF330Q9Y3S2 320 aaPredicted RBP11.78□□□□□ -0.52
USP34-218ENST00000490552 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
USP34-218ENST00000490552 ARFGEF2Q9Y6D5 1785 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 RREB1Q92766 1687 aa11.78□□□□□ -0.52
USP34-218ENST00000490552 MTX1Q13505 466 aa11.77□□□□□ -0.52
USP34-218ENST00000490552 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.52
USP34-218ENST00000490552 GIGYF2Q6Y7W6 1299 aaKnown RBP11.77□□□□□ -0.52
USP34-218ENST00000490552 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.52
USP34-218ENST00000490552 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.52
USP34-218ENST00000490552 NUCB1Q02818 461 aa11.77□□□□□ -0.53
USP34-218ENST00000490552 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
USP34-218ENST00000490552 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
USP34-218ENST00000490552 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
USP34-218ENST00000490552 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.53
USP34-218ENST00000490552 COL5A3P25940 1745 aaPredicted RBP11.76□□□□□ -0.53
USP34-218ENST00000490552 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
USP34-218ENST00000490552 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
USP34-218ENST00000490552 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
USP34-218ENST00000490552 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
USP34-218ENST00000490552 LY75O60449 1722 aa11.75□□□□□ -0.53
USP34-218ENST00000490552 BRWD3Q6RI45 1802 aa11.75□□□□□ -0.53
USP34-218ENST00000490552 ARXQ96QS3 562 aa11.75□□□□□ -0.53
USP34-218ENST00000490552 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
USP34-218ENST00000490552 H7C1W4 665 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 LINC00116Q8NCU8 138 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 HSP90B1P14625 803 aaKnown RBP11.74□□□□□ -0.53
USP34-218ENST00000490552 POLA2Q14181 598 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 PTF1AQ7RTS3 328 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
USP34-218ENST00000490552 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
USP34-218ENST00000490552 PLSCR1O15162 318 aa11.73□□□□□ -0.53
USP34-218ENST00000490552 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
USP34-218ENST00000490552 TRIM37O94972 964 aa11.73□□□□□ -0.53
USP34-218ENST00000490552 ADRA2BP18089 450 aa11.73□□□□□ -0.53
USP34-218ENST00000490552 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
USP34-218ENST00000490552 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
USP34-218ENST00000490552 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
USP34-218ENST00000490552 PARP10Q53GL7 1025 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 ZBTB38Q8NAP3 1195 aaPredicted RBP11.72□□□□□ -0.53
USP34-218ENST00000490552 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
USP34-218ENST00000490552 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 RGS3P49796 1198 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 CASP7P55210 303 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
USP34-218ENST00000490552 ZNF34Q8IZ26 560 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 AK7Q96M32 723 aa11.72□□□□□ -0.53
USP34-218ENST00000490552 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.54
USP34-218ENST00000490552 CAMTA2O94983 1202 aa11.71□□□□□ -0.54
USP34-218ENST00000490552 POTEAQ6S8J7 498 aa11.71□□□□□ -0.54
USP34-218ENST00000490552 NLRP10Q86W26 655 aa11.71□□□□□ -0.54
USP34-218ENST00000490552 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.54
USP34-218ENST00000490552 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms