RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 TPTE2Q6XPS3 522 aa14.97□□□□□ -0.01
CDCP1-203ENST00000490471 MCM10Q7L590 875 aa14.97□□□□□ -0.01
CDCP1-203ENST00000490471 BCL2L12Q9HB09 334 aa14.97□□□□□ -0.01
CDCP1-203ENST00000490471 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
CDCP1-203ENST00000490471 KIF3CO14782 793 aa14.96□□□□□ -0.01
CDCP1-203ENST00000490471 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.01
CDCP1-203ENST00000490471 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.01
CDCP1-203ENST00000490471 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
CDCP1-203ENST00000490471 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
CDCP1-203ENST00000490471 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
CDCP1-203ENST00000490471 USP16Q9Y5T5 823 aa14.95□□□□□ -0.02
CDCP1-203ENST00000490471 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
CDCP1-203ENST00000490471 AFDNP55196 1824 aaKnown RBP14.94□□□□□ -0.02
CDCP1-203ENST00000490471 FSTL1Q12841 308 aa14.94□□□□□ -0.02
CDCP1-203ENST00000490471 STYK1Q6J9G0 422 aa14.94□□□□□ -0.02
CDCP1-203ENST00000490471 NBPF5PQ86XG9 351 aaPredicted RBP14.94□□□□□ -0.02
CDCP1-203ENST00000490471 MASTLQ96GX5 879 aa14.94□□□□□ -0.02
CDCP1-203ENST00000490471 CAMTA2O94983 1202 aa14.93□□□□□ -0.02
CDCP1-203ENST00000490471 NFE2L2Q16236 605 aa14.93□□□□□ -0.02
CDCP1-203ENST00000490471 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
CDCP1-203ENST00000490471 NYXQ9GZU5 481 aa14.93□□□□□ -0.02
CDCP1-203ENST00000490471 KCNQ3O43525 872 aa14.92□□□□□ -0.02
CDCP1-203ENST00000490471 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
CDCP1-203ENST00000490471 SPDYE2BA6NHP3 402 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 SPDYE6P0CI01 402 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 VEGFAP15692 232 aaPredicted RBP14.91□□□□□ -0.02
CDCP1-203ENST00000490471 ALDH1B1P30837 517 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 DCTN1Q14203 1278 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 SPDYE2Q495Y8 402 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 RRAGCQ9HB90 399 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 NMRK2Q9NPI5 230 aa14.91□□□□□ -0.02
CDCP1-203ENST00000490471 NIP7Q9Y221 180 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDCP1-203ENST00000490471 DLEC1Q9Y238 1755 aa14.9□□□□□ -0.02
CDCP1-203ENST00000490471 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
CDCP1-203ENST00000490471 GLTPD2A6NH11 291 aa14.9□□□□□ -0.02
CDCP1-203ENST00000490471 SMC1BQ8NDV3 1235 aa14.9□□□□□ -0.02
CDCP1-203ENST00000490471 TMX4Q9H1E5 349 aaPredicted RBP14.9□□□□□ -0.02
CDCP1-203ENST00000490471 BABAM1Q9NWV8 329 aa14.9□□□□□ -0.02
CDCP1-203ENST00000490471 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
CDCP1-203ENST00000490471 C21orf2O43822 256 aa14.89□□□□□ -0.03
CDCP1-203ENST00000490471 NPR1P16066 1061 aa14.89□□□□□ -0.03
CDCP1-203ENST00000490471 TAOK3Q9H2K8 898 aa14.89□□□□□ -0.03
CDCP1-203ENST00000490471 ERBB4Q15303 1308 aa14.89□□□□□ -0.03
CDCP1-203ENST00000490471 SRGNP10124 158 aa14.88□□□□□ -0.03
CDCP1-203ENST00000490471 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
CDCP1-203ENST00000490471 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDCP1-203ENST00000490471 ERFEQ4G0M1 354 aa14.88□□□□□ -0.03
CDCP1-203ENST00000490471 SBF1O95248 1867 aa14.88□□□□□ -0.03
CDCP1-203ENST00000490471 LTBP3Q9NS15 1303 aa14.88□□□□□ -0.03
CDCP1-203ENST00000490471 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
CDCP1-203ENST00000490471 RIPK4P57078 832 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 RASSF7Q02833 373 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 GRIPAP1Q4V328 841 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 CCDC93Q567U6 631 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 RTKN2Q8IZC4 609 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
CDCP1-203ENST00000490471 RRP7AQ9Y3A4 280 aaKnown RBP14.87□□□□□ -0.03
CDCP1-203ENST00000490471 EIF4A1P60842 406 aaKnown RBP14.86□□□□□ -0.03
CDCP1-203ENST00000490471 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
CDCP1-203ENST00000490471 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
CDCP1-203ENST00000490471 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
CDCP1-203ENST00000490471 BCORQ6W2J9 1755 aa14.85□□□□□ -0.03
CDCP1-203ENST00000490471 PIP4K2AP48426 406 aaPredicted RBP14.85□□□□□ -0.03
CDCP1-203ENST00000490471 CC2D2BQ6DHV5 1058 aa14.85□□□□□ -0.03
CDCP1-203ENST00000490471 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
CDCP1-203ENST00000490471 NGEFQ8N5V2 710 aa14.85□□□□□ -0.03
CDCP1-203ENST00000490471 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
CDCP1-203ENST00000490471 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
CDCP1-203ENST00000490471 CCDC24Q8N4L8 307 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 DLG5Q8TDM6 1919 aa14.84□□□□□ -0.03
CDCP1-203ENST00000490471 IQCA1LA6NCM1 817 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 NFKBIEO00221 500 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 MYL6BP14649 208 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 HSP90AB3PQ58FF7 597 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
CDCP1-203ENST00000490471 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.04
CDCP1-203ENST00000490471 CCDC88AQ3V6T2 1871 aa14.82□□□□□ -0.04
CDCP1-203ENST00000490471 ANKRD31Q8N7Z5 1873 aa14.82□□□□□ -0.04
CDCP1-203ENST00000490471 KLRG2A4D1S0 409 aaPredicted RBP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 EIF2S2P20042 333 aaKnown RBP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 ZEB1P37275 1124 aaPredicted RBP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 TMPOP42166 694 aaKnown RBP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 FKBP4Q02790 459 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 JDP2Q8WYK2 163 aa14.81□□□□□ -0.04
CDCP1-203ENST00000490471 RUNDC1Q96C34 613 aa14.81□□□□□ -0.04
CDCP1-203ENST00000490471 RBM17Q96I25 401 aaKnown RBP14.81□□□□□ -0.04
CDCP1-203ENST00000490471 KDM3BQ7LBC6 1761 aa14.8□□□□□ -0.04
CDCP1-203ENST00000490471 CALD1Q05682 793 aaKnown RBP14.8□□□□□ -0.04
CDCP1-203ENST00000490471 GIGYF2Q6Y7W6 1299 aaKnown RBP14.8□□□□□ -0.04
CDCP1-203ENST00000490471 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
CDCP1-203ENST00000490471 IBTKQ9P2D0 1353 aaPredicted RBP14.8□□□□□ -0.04
CDCP1-203ENST00000490471 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms