RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CAMTA2O94983 1202 aa26.54■■□□□ 1.84
UPK3B-205ENST00000490360 L3MBTL3Q96JM7 780 aaPredicted RBP26.54■■□□□ 1.84
UPK3B-205ENST00000490360 CLEC4GQ6UXB4 293 aa26.53■■□□□ 1.84
UPK3B-205ENST00000490360 CCDC24Q8N4L8 307 aa26.53■■□□□ 1.84
UPK3B-205ENST00000490360 CNTNAP1P78357 1384 aa26.52■■□□□ 1.84
UPK3B-205ENST00000490360 PRDM10Q9NQV6 1147 aa26.52■■□□□ 1.84
UPK3B-205ENST00000490360 CACNA1SQ13698 1873 aa26.51■■□□□ 1.83
UPK3B-205ENST00000490360 PER1O15534 1290 aaPredicted RBP26.51■■□□□ 1.83
UPK3B-205ENST00000490360 A1BGP04217 495 aa26.51■■□□□ 1.83
UPK3B-205ENST00000490360 DZIP3Q86Y13 1208 aaKnown RBP26.51■■□□□ 1.83
UPK3B-205ENST00000490360 PASKQ96RG2 1323 aa26.5■■□□□ 1.83
UPK3B-205ENST00000490360 CCDC93Q567U6 631 aa26.5■■□□□ 1.83
UPK3B-205ENST00000490360 ZNF652Q9Y2D9 606 aa26.5■■□□□ 1.83
UPK3B-205ENST00000490360 BCORQ6W2J9 1755 aa26.5■■□□□ 1.83
UPK3B-205ENST00000490360 CEMIPQ8WUJ3 1361 aa26.49■■□□□ 1.83
UPK3B-205ENST00000490360 KIF7Q2M1P5 1343 aa26.49■■□□□ 1.83
UPK3B-205ENST00000490360 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
UPK3B-205ENST00000490360 RGL2O15211 777 aa26.49■■□□□ 1.83
UPK3B-205ENST00000490360 POTEIP0CG38 1075 aa26.49■■□□□ 1.83
UPK3B-205ENST00000490360 POTEJP0CG39 1038 aa26.49■■□□□ 1.83
UPK3B-205ENST00000490360 NBPF5PQ86XG9 351 aaPredicted RBP26.49■■□□□ 1.83
UPK3B-205ENST00000490360 TAF1DQ9H5J8 278 aaPredicted RBP26.49■■□□□ 1.83
UPK3B-205ENST00000490360 NPR1P16066 1061 aa26.48■■□□□ 1.83
UPK3B-205ENST00000490360 CC2D1BQ5T0F9 858 aaKnown RBP26.48■■□□□ 1.83
UPK3B-205ENST00000490360 C7orf43Q8WVR3 580 aa26.48■■□□□ 1.83
UPK3B-205ENST00000490360 AIDAQ96BJ3 306 aa26.48■■□□□ 1.83
UPK3B-205ENST00000490360 TMEM88BA6NKF7 163 aa26.47■■□□□ 1.83
UPK3B-205ENST00000490360 BTBD11A6QL63 1104 aa26.47■■□□□ 1.83
UPK3B-205ENST00000490360 NPC1L1Q9UHC9 1359 aa26.46■■□□□ 1.83
UPK3B-205ENST00000490360 CTCFP49711 727 aaPredicted RBP26.46■■□□□ 1.83
UPK3B-205ENST00000490360 COL3A1P02461 1466 aaPredicted RBP26.46■■□□□ 1.83
UPK3B-205ENST00000490360 KLRG2A4D1S0 409 aaPredicted RBP26.45■■□□□ 1.82
UPK3B-205ENST00000490360 FOXN1O15353 648 aa26.45■■□□□ 1.82
UPK3B-205ENST00000490360 FKBP4Q02790 459 aaKnown RBP eCLIP26.45■■□□□ 1.82
UPK3B-205ENST00000490360 TPTE2Q6XPS3 522 aa26.45■■□□□ 1.82
UPK3B-205ENST00000490360 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
UPK3B-205ENST00000490360 PNMA8AQ86V59 439 aaPredicted RBP26.44■■□□□ 1.82
UPK3B-205ENST00000490360 HACL1Q9UJ83 578 aa26.44■■□□□ 1.82
UPK3B-205ENST00000490360 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
UPK3B-205ENST00000490360 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
UPK3B-205ENST00000490360 ALDH1B1P30837 517 aa26.41■■□□□ 1.82
UPK3B-205ENST00000490360 VEGFBP49765 207 aa26.41■■□□□ 1.82
UPK3B-205ENST00000490360 USP16Q9Y5T5 823 aa26.41■■□□□ 1.82
UPK3B-205ENST00000490360 EAPPQ56P03 285 aaPredicted RBP26.4■■□□□ 1.82
UPK3B-205ENST00000490360 EPHX2P34913 555 aa26.39■■□□□ 1.82
UPK3B-205ENST00000490360 CLEC11AQ9Y240 323 aa26.39■■□□□ 1.82
UPK3B-205ENST00000490360 KCNQ3O43525 872 aa26.38■■□□□ 1.81
UPK3B-205ENST00000490360 ZNF277Q9NRM2 450 aaPredicted RBP26.38■■□□□ 1.81
UPK3B-205ENST00000490360 WBP1LQ9NX94 342 aa26.38■■□□□ 1.81
UPK3B-205ENST00000490360 RTF1Q92541 710 aaKnown RBP26.37■■□□□ 1.81
UPK3B-205ENST00000490360 CFAP53Q96M91 514 aa26.37■■□□□ 1.81
UPK3B-205ENST00000490360 NIP7Q9Y221 180 aaKnown RBP eCLIP26.37■■□□□ 1.81
UPK3B-205ENST00000490360 ZNF541Q9H0D2 1346 aa26.37■■□□□ 1.81
UPK3B-205ENST00000490360 ADAMTSL1Q8N6G6 1762 aa26.36■■□□□ 1.81
UPK3B-205ENST00000490360 RASSF10A6NK89 507 aa26.36■■□□□ 1.81
UPK3B-205ENST00000490360 FZD9O00144 591 aa26.36■■□□□ 1.81
UPK3B-205ENST00000490360 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
UPK3B-205ENST00000490360 GPC2Q8N158 579 aa26.36■■□□□ 1.81
UPK3B-205ENST00000490360 IARSP41252 1262 aaKnown RBP26.35■■□□□ 1.81
UPK3B-205ENST00000490360 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
UPK3B-205ENST00000490360 PHACTR3Q96KR7 559 aa26.35■■□□□ 1.81
UPK3B-205ENST00000490360 MAP2K1Q02750 393 aaPredicted RBP26.34■■□□□ 1.81
UPK3B-205ENST00000490360 DEFB115Q30KQ5 88 aa26.34■■□□□ 1.81
UPK3B-205ENST00000490360 CC2D2BQ6DHV5 1058 aa26.34■■□□□ 1.81
UPK3B-205ENST00000490360 JDP2Q8WYK2 163 aa26.34■■□□□ 1.81
UPK3B-205ENST00000490360 RSPH6AQ9H0K4 717 aa26.34■■□□□ 1.81
UPK3B-205ENST00000490360 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
UPK3B-205ENST00000490360 GTF2E1P29083 439 aaPredicted RBP26.33■■□□□ 1.81
UPK3B-205ENST00000490360 PIP4K2AP48426 406 aaPredicted RBP26.33■■□□□ 1.81
UPK3B-205ENST00000490360 GRIPAP1Q4V328 841 aa26.33■■□□□ 1.81
UPK3B-205ENST00000490360 SYNE4Q8N205 404 aa26.33■■□□□ 1.81
UPK3B-205ENST00000490360 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
UPK3B-205ENST00000490360 PSMD1Q99460 953 aa26.33■■□□□ 1.81
UPK3B-205ENST00000490360 HTATSF1O43719 755 aaKnown RBP26.31■■□□□ 1.8
UPK3B-205ENST00000490360 LBX1P52954 281 aa26.31■■□□□ 1.8
UPK3B-205ENST00000490360 NYXQ9GZU5 481 aa26.31■■□□□ 1.8
UPK3B-205ENST00000490360 RNF123Q5XPI4 1314 aa26.31■■□□□ 1.8
UPK3B-205ENST00000490360 PRAMEF22A3QJZ6 481 aa26.3■■□□□ 1.8
UPK3B-205ENST00000490360 NBPF26B4DH59 902 aa26.29■■□□□ 1.8
UPK3B-205ENST00000490360 MAP1SQ66K74 1059 aaPredicted RBP26.29■■□□□ 1.8
UPK3B-205ENST00000490360 NBPF10Q6P3W6 841 aaKnown RBP26.29■■□□□ 1.8
UPK3B-205ENST00000490360 NBPF15Q8N660 670 aa26.29■■□□□ 1.8
UPK3B-205ENST00000490360 EIF6P56537 245 aaKnown RBP26.28■■□□□ 1.8
UPK3B-205ENST00000490360 CRY2Q49AN0 593 aa26.28■■□□□ 1.8
UPK3B-205ENST00000490360 WDR33Q9C0J8 1336 aaKnown RBP26.28■■□□□ 1.8
UPK3B-205ENST00000490360 LMOD1P29536 600 aaPredicted RBP26.27■■□□□ 1.8
UPK3B-205ENST00000490360 OLFM4Q6UX06 510 aa26.27■■□□□ 1.8
UPK3B-205ENST00000490360 MCM10Q7L590 875 aa26.27■■□□□ 1.8
UPK3B-205ENST00000490360 ABT1Q9ULW3 272 aaKnown RBP26.27■■□□□ 1.8
UPK3B-205ENST00000490360 FAM177BA6PVY3 158 aa26.26■■□□□ 1.79
UPK3B-205ENST00000490360 ERVV-1B6SEH8 477 aa26.26■■□□□ 1.79
UPK3B-205ENST00000490360 HSPA8P11142 646 aaKnown RBP26.25■■□□□ 1.79
UPK3B-205ENST00000490360 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
UPK3B-205ENST00000490360 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
UPK3B-205ENST00000490360 SNED1Q8TER0 1413 aa26.24■■□□□ 1.79
UPK3B-205ENST00000490360 U2AF1L5P0DN76 240 aaPredicted RBP26.24■■□□□ 1.79
UPK3B-205ENST00000490360 ECE1P42892 770 aa26.24■■□□□ 1.79
UPK3B-205ENST00000490360 U2AF1Q01081 240 aaKnown RBP eCLIP26.24■■□□□ 1.79
UPK3B-205ENST00000490360 CNGB1Q14028 1251 aaPredicted RBP26.24■■□□□ 1.79
UPK3B-205ENST00000490360 HLFQ16534 295 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms