RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
CHKB-211ENST00000489453 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
CHKB-211ENST00000489453 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
CHKB-211ENST00000489453 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
CHKB-211ENST00000489453 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHKB-211ENST00000489453 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
CHKB-211ENST00000489453 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
CHKB-211ENST00000489453 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
CHKB-211ENST00000489453 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
CHKB-211ENST00000489453 KCNQ3O43525 872 aa13.86□□□□□ -0.19
CHKB-211ENST00000489453 PRPF40BQ6NWY9 871 aaKnown RBP13.86□□□□□ -0.19
CHKB-211ENST00000489453 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
CHKB-211ENST00000489453 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
CHKB-211ENST00000489453 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
CHKB-211ENST00000489453 SCN4AP35499 1836 aa13.85□□□□□ -0.19
CHKB-211ENST00000489453 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
CHKB-211ENST00000489453 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
CHKB-211ENST00000489453 NEFMP07197 916 aa13.84□□□□□ -0.19
CHKB-211ENST00000489453 SRGNP10124 158 aa13.84□□□□□ -0.19
CHKB-211ENST00000489453 MCM10Q7L590 875 aa13.84□□□□□ -0.19
CHKB-211ENST00000489453 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
CHKB-211ENST00000489453 NUP98P52948 1817 aa13.83□□□□□ -0.2
CHKB-211ENST00000489453 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
CHKB-211ENST00000489453 COL13A1Q5TAT6 717 aaPredicted RBP13.83□□□□□ -0.2
CHKB-211ENST00000489453 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
CHKB-211ENST00000489453 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
CHKB-211ENST00000489453 PCNTO95613 3336 aa13.82□□□□□ -0.2
CHKB-211ENST00000489453 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
CHKB-211ENST00000489453 NPR1P16066 1061 aa13.82□□□□□ -0.2
CHKB-211ENST00000489453 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
CHKB-211ENST00000489453 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
CHKB-211ENST00000489453 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHKB-211ENST00000489453 IQCA1LA6NCM1 817 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 POTECB2RU33 542 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 CAPN15O75808 1086 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 DDNO94850 711 aaPredicted RBP13.81□□□□□ -0.2
CHKB-211ENST00000489453 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
CHKB-211ENST00000489453 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
CHKB-211ENST00000489453 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
CHKB-211ENST00000489453 PPP2R1AP30153 589 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
CHKB-211ENST00000489453 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
CHKB-211ENST00000489453 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
CHKB-211ENST00000489453 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHKB-211ENST00000489453 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
CHKB-211ENST00000489453 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
CHKB-211ENST00000489453 RGL2O15211 777 aa13.78□□□□□ -0.2
CHKB-211ENST00000489453 ALDH1B1P30837 517 aa13.78□□□□□ -0.2
CHKB-211ENST00000489453 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
CHKB-211ENST00000489453 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CHKB-211ENST00000489453 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
CHKB-211ENST00000489453 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
CHKB-211ENST00000489453 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
CHKB-211ENST00000489453 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 NGEFQ8N5V2 710 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
CHKB-211ENST00000489453 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
CHKB-211ENST00000489453 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
CHKB-211ENST00000489453 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
CHKB-211ENST00000489453 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
CHKB-211ENST00000489453 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
CHKB-211ENST00000489453 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
CHKB-211ENST00000489453 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
CHKB-211ENST00000489453 HLFQ16534 295 aa13.75□□□□□ -0.21
CHKB-211ENST00000489453 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
CHKB-211ENST00000489453 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
CHKB-211ENST00000489453 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
CHKB-211ENST00000489453 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
CHKB-211ENST00000489453 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
CHKB-211ENST00000489453 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
CHKB-211ENST00000489453 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
CHKB-211ENST00000489453 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
CHKB-211ENST00000489453 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
CHKB-211ENST00000489453 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
CHKB-211ENST00000489453 EPHX2P34913 555 aa13.73□□□□□ -0.21
CHKB-211ENST00000489453 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
CHKB-211ENST00000489453 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
CHKB-211ENST00000489453 CNTNAP1P78357 1384 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 ABCC12Q96J65 1359 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 TMEM88BA6NKF7 163 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 MYL6BP14649 208 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 EIF6P56537 245 aaKnown RBP13.72□□□□□ -0.21
CHKB-211ENST00000489453 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
CHKB-211ENST00000489453 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
CHKB-211ENST00000489453 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 GPTP24298 496 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
CHKB-211ENST00000489453 NFE2L2Q16236 605 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms