RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NPHP3Q7Z494 1330 aa23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 KDM6AO15550 1401 aaPredicted RBP23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 ECHDC1Q9NTX5 307 aa23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 SPG7Q9UQ90 795 aa23.72■■□□□ 1.39
SYNGR1-207ENST00000489206 ZNF790Q6PG37 636 aa23.71■■□□□ 1.39
SYNGR1-207ENST00000489206 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
SYNGR1-207ENST00000489206 MAP4K4O95819 1239 aaPredicted RBP23.71■■□□□ 1.39
SYNGR1-207ENST00000489206 KIAA1211Q6ZU35 1233 aa23.71■■□□□ 1.39
SYNGR1-207ENST00000489206 PDIA6Q15084 440 aa23.7■■□□□ 1.38
SYNGR1-207ENST00000489206 PRAMEF22A3QJZ6 481 aa23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 CWF19L2Q2TBE0 894 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 LARP1Q6PKG0 1096 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 RRAGDQ9NQL2 400 aaPredicted RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 XIRP1Q702N8 1843 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 PARP4Q9UKK3 1724 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 IFIT2P09913 472 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 PHKG2P15735 406 aa23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 ATF3P18847 181 aa23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 ZC3H6P61129 1189 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-207ENST00000489206 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
SYNGR1-207ENST00000489206 DIAPH3Q9NSV4 1193 aa23.68■■□□□ 1.38
SYNGR1-207ENST00000489206 SNX14Q9Y5W7 946 aa23.68■■□□□ 1.38
SYNGR1-207ENST00000489206 MEGF6O75095 1541 aa23.68■■□□□ 1.38
SYNGR1-207ENST00000489206 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
SYNGR1-207ENST00000489206 PRPF40AO75400 957 aaKnown RBP23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 SUCLG2Q96I99 432 aa23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 NLRP2Q9NX02 1062 aa23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 MBD3O95983 291 aa23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 IFNL2Q8IZJ0 200 aa23.67■■□□□ 1.38
SYNGR1-207ENST00000489206 AFDNP55196 1824 aaKnown RBP23.66■■□□□ 1.38
SYNGR1-207ENST00000489206 ZSCAN23Q3MJ62 389 aa23.66■■□□□ 1.38
SYNGR1-207ENST00000489206 CAVIN1Q6NZI2 390 aaKnown RBP23.66■■□□□ 1.38
SYNGR1-207ENST00000489206 EVI5LQ96CN4 794 aa23.66■■□□□ 1.38
SYNGR1-207ENST00000489206 TNS3Q68CZ2 1445 aa23.66■■□□□ 1.38
SYNGR1-207ENST00000489206 HIP1O00291 1037 aa23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 TTC14Q96N46 770 aa23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 NCLP19338 710 aaKnown RBP23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 CCDC173Q0VFZ6 552 aa23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 G3BP1Q13283 466 aaKnown RBP eCLIP23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 CWC27Q6UX04 472 aaKnown RBP23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 RIC3Q7Z5B4 369 aa23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
SYNGR1-207ENST00000489206 NASPP49321 788 aaPredicted RBP23.64■■□□□ 1.38
SYNGR1-207ENST00000489206 BICC1Q9H694 974 aaKnown RBP23.64■■□□□ 1.38
SYNGR1-207ENST00000489206 PA2G4Q9UQ80 394 aaKnown RBP23.64■■□□□ 1.38
SYNGR1-207ENST00000489206 TMEM94Q12767 1356 aa23.64■■□□□ 1.37
SYNGR1-207ENST00000489206 WDR33Q9C0J8 1336 aaKnown RBP23.64■■□□□ 1.37
SYNGR1-207ENST00000489206 AACSQ86V21 672 aa23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 GPT2Q8TD30 523 aa23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 IGKV5-2P06315 115 aa23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 AIMP1Q12904 312 aaKnown RBP23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 ANP32BQ92688 251 aaKnown RBP23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 KCNB2Q92953 911 aa23.63■■□□□ 1.37
SYNGR1-207ENST00000489206 CLCN1P35523 988 aa23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 NOL8Q76FK4 1167 aaKnown RBP23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 PPP1R9BQ96SB3 815 aa23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 COL15A1P39059 1388 aa23.62■■□□□ 1.37
SYNGR1-207ENST00000489206 NEURL1BA8MQ27 555 aa23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 TRIM44Q96DX7 344 aaPredicted RBP23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 TM6SF1Q9BZW5 370 aa23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 SASH1O94885 1247 aa23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 LIMCH1Q9UPQ0 1083 aa23.61■■□□□ 1.37
SYNGR1-207ENST00000489206 CPDO75976 1380 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 GCKRQ14397 625 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 RASEFQ8IZ41 740 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 TTC5Q8N0Z6 440 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 XAGE3Q8WTP9 111 aa23.6■■□□□ 1.37
SYNGR1-207ENST00000489206 CSB-PGBD3P0DP91 1061 aa23.59■■□□□ 1.37
SYNGR1-207ENST00000489206 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
SYNGR1-207ENST00000489206 SNRKQ9NRH2 765 aa23.59■■□□□ 1.37
SYNGR1-207ENST00000489206 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.59■■□□□ 1.37
SYNGR1-207ENST00000489206 GLI3P10071 1580 aa23.59■■□□□ 1.37
SYNGR1-207ENST00000489206 AK2P54819 239 aa23.58■■□□□ 1.37
SYNGR1-207ENST00000489206 ZNF496Q96IT1 587 aaPredicted RBP23.58■■□□□ 1.37
SYNGR1-207ENST00000489206 COPS6Q7L5N1 327 aa23.58■■□□□ 1.36
SYNGR1-207ENST00000489206 EAF2Q96CJ1 260 aaPredicted RBP23.58■■□□□ 1.36
SYNGR1-207ENST00000489206 FMNL2Q96PY5 1086 aa23.58■■□□□ 1.36
SYNGR1-207ENST00000489206 LRP10Q7Z4F1 713 aa23.57■■□□□ 1.36
SYNGR1-207ENST00000489206 CCDC171Q6TFL3 1326 aa23.57■■□□□ 1.36
SYNGR1-207ENST00000489206 ESPNB1AK53 854 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 MYL6BP14649 208 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 VPS53Q5VIR6 699 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 MYD88Q99836 296 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 RPAP1Q9BWH6 1393 aaPredicted RBP23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 FOXD4L5Q5VV16 416 aaPredicted RBP23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 LRSAM1Q6UWE0 723 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 FOXD4L4Q8WXT5 416 aaPredicted RBP23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 ZSCAN31Q96LW9 406 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms