RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 TNPO1Q92973 898 aaKnown RBP11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 QTRT2Q9H974 415 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-211ENST00000489158 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
EXOSC1-211ENST00000489158 ISY1Q9ULR0 285 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-211ENST00000489158 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 SNX21Q969T3 373 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 ACSBG1Q96GR2 724 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 TJP1Q07157 1748 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 IBTKQ9P2D0 1353 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 MYL6BP14649 208 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 SMARCC1Q92922 1105 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 ATP10DQ9P241 1426 aa11.09□□□□□ -0.63
EXOSC1-211ENST00000489158 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 TRIM44Q96DX7 344 aaPredicted RBP11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 AIMP1Q12904 312 aaKnown RBP11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 PDIA6Q15084 440 aa11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 PROSER3Q2NL68 480 aa11.08□□□□□ -0.64
EXOSC1-211ENST00000489158 PIP4K2AP48426 406 aaPredicted RBP11.07□□□□□ -0.64
EXOSC1-211ENST00000489158 SEPT12Q8IYM1 358 aa11.07□□□□□ -0.64
EXOSC1-211ENST00000489158 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
EXOSC1-211ENST00000489158 GBP4Q96PP9 640 aa11.07□□□□□ -0.64
EXOSC1-211ENST00000489158 RREB1Q92766 1687 aa11.07□□□□□ -0.64
EXOSC1-211ENST00000489158 PI4KAP2A4QPH2 592 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 STARD3NLO95772 234 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 RAB3GAP1Q15042 981 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 PI4KAP1Q8N8J0 262 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 LNPKQ9C0E8 428 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 BTAF1O14981 1849 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 ARFGEF2Q9Y6D5 1785 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 NUCB1Q02818 461 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 DNAAF4Q8WXU2 420 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 BRWD3Q6RI45 1802 aa11.06□□□□□ -0.64
EXOSC1-211ENST00000489158 ADCY9O60503 1353 aa11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 SKOR2Q2VWA4 1001 aaPredicted RBP11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 COL5A3P25940 1745 aaPredicted RBP11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 NUP188Q5SRE5 1749 aa11.05□□□□□ -0.64
EXOSC1-211ENST00000489158 LY75O60449 1722 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 GNAI3P08754 354 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 KIF2CQ99661 725 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 MEIS3Q99687 375 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 SRCIN1Q9C0H9 1055 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
EXOSC1-211ENST00000489158 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 A1BGP04217 495 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 PTMSP20962 102 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 KCNQ2O43526 872 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
EXOSC1-211ENST00000489158 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 NBPF26B4DH59 902 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 SSFA2P28290 1259 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 SIK1P57059 783 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 NBPF14Q5TI25 921 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 NBPF15Q8N660 670 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.64
EXOSC1-211ENST00000489158 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 POTEAQ6S8J7 498 aa11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 LINS1Q8NG48 757 aa11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
EXOSC1-211ENST00000489158 TPM2P07951 284 aa11.01□□□□□ -0.65
EXOSC1-211ENST00000489158 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
EXOSC1-211ENST00000489158 BMP2KLQ5H9B9 411 aa11.01□□□□□ -0.65
EXOSC1-211ENST00000489158 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
EXOSC1-211ENST00000489158 METTL22Q9BUU2 404 aaPredicted RBP11.01□□□□□ -0.65
EXOSC1-211ENST00000489158 GNAI2P04899 355 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms