RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 UBR3Q6ZT12 1888 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 ANXA1P04083 346 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 A1BGP04217 495 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
USP11-209ENST00000488848 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 COPS6Q7L5N1 327 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
USP11-209ENST00000488848 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
USP11-209ENST00000488848 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
USP11-209ENST00000488848 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
USP11-209ENST00000488848 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
USP11-209ENST00000488848 NUP98P52948 1817 aa13.52□□□□□ -0.25
USP11-209ENST00000488848 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
USP11-209ENST00000488848 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
USP11-209ENST00000488848 F6X3S4 739 aa13.51□□□□□ -0.25
USP11-209ENST00000488848 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
USP11-209ENST00000488848 MAP3K2Q9Y2U5 619 aa13.51□□□□□ -0.25
USP11-209ENST00000488848 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 IGKV5-2P06315 115 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 GNAI3P08754 354 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 MYL6BP14649 208 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 ADRA2BP18089 450 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
USP11-209ENST00000488848 CCNL1Q9UK58 526 aaPredicted RBP13.5□□□□□ -0.25
USP11-209ENST00000488848 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
USP11-209ENST00000488848 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
USP11-209ENST00000488848 A0A087WZG4 1122 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 TRIM37O94972 964 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
USP11-209ENST00000488848 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 USP44Q9H0E7 712 aa13.49□□□□□ -0.25
USP11-209ENST00000488848 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 MTX1Q13505 466 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 CLEC4GQ6UXB4 293 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
USP11-209ENST00000488848 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 RPAP2Q8IXW5 612 aaPredicted RBP13.47□□□□□ -0.25
USP11-209ENST00000488848 PROM2Q8N271 834 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 MEIS3Q99687 375 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
USP11-209ENST00000488848 LAMB2P55268 1798 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 TCIRG1Q13488 830 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 GCKRQ14397 625 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 TXNRD1Q16881 649 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 CENPQQ7L2Z9 268 aaPredicted RBP13.46□□□□□ -0.25
USP11-209ENST00000488848 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
USP11-209ENST00000488848 GRM8O00222 908 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 GNAI2P04899 355 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 SSFA2P28290 1259 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
USP11-209ENST00000488848 CASP7P55210 303 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
USP11-209ENST00000488848 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 CCDC125Q86Z20 511 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
USP11-209ENST00000488848 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
USP11-209ENST00000488848 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
USP11-209ENST00000488848 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
USP11-209ENST00000488848 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
USP11-209ENST00000488848 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
USP11-209ENST00000488848 H7C1W4 665 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 RABL6Q3YEC7 729 aaPredicted RBP13.43□□□□□ -0.26
USP11-209ENST00000488848 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
USP11-209ENST00000488848 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
USP11-209ENST00000488848 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
USP11-209ENST00000488848 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
USP11-209ENST00000488848 APBA3O96018 575 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
USP11-209ENST00000488848 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
USP11-209ENST00000488848 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
USP11-209ENST00000488848 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 AK7Q96M32 723 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 MYD88Q99836 296 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
USP11-209ENST00000488848 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
USP11-209ENST00000488848 GNPATO15228 680 aa13.41□□□□□ -0.26
USP11-209ENST00000488848 PCCAP05165 728 aaPredicted RBP13.41□□□□□ -0.26
USP11-209ENST00000488848 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
USP11-209ENST00000488848 NPM2Q86SE8 214 aaKnown RBP13.41□□□□□ -0.26
USP11-209ENST00000488848 NLRP10Q86W26 655 aa13.41□□□□□ -0.26
USP11-209ENST00000488848 SSH3Q8TE77 659 aa13.41□□□□□ -0.26
USP11-209ENST00000488848 KAZALD1Q96I82 304 aa13.41□□□□□ -0.26
USP11-209ENST00000488848 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms