RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TNS4Q8IZW8 715 aa6.82□□□□□ -1.32
CD46-215ENST00000488596 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 EML1O00423 815 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 PSME1Q06323 249 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 SH3PXD2AQ5TCZ1 1133 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 LRRC69Q6ZNQ3 347 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 PLVAPQ9BX97 442 aa6.81□□□□□ -1.32
CD46-215ENST00000488596 ZBTB7BO15156 539 aaPredicted RBP6.8□□□□□ -1.32
CD46-215ENST00000488596 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
CD46-215ENST00000488596 SYT9Q86SS6 491 aa6.8□□□□□ -1.32
CD46-215ENST00000488596 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
CD46-215ENST00000488596 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
CD46-215ENST00000488596 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
CD46-215ENST00000488596 ELOA3DA6NLF2 546 aaPredicted RBP6.79□□□□□ -1.32
CD46-215ENST00000488596 USP17L5A8MUK1 530 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 GATA4P43694 442 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 SFSWAPQ12872 951 aaKnown RBP6.79□□□□□ -1.32
CD46-215ENST00000488596 ELOA3BQ3SY89 546 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 ARTNQ5T4W7 220 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 ELOA3Q8NG57 546 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 MDFIQ99750 246 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 ZNF232Q9UNY5 417 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
CD46-215ENST00000488596 POM121CA8CG34 1229 aa6.78□□□□□ -1.32
CD46-215ENST00000488596 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
CD46-215ENST00000488596 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
CD46-215ENST00000488596 CLDN10P78369 228 aa6.77□□□□□ -1.33
CD46-215ENST00000488596 SIN3BO75182 1162 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 ALAS2P22557 587 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 COL9A3Q14050 684 aaPredicted RBP6.76□□□□□ -1.33
CD46-215ENST00000488596 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
CD46-215ENST00000488596 FOXD4L6Q3SYB3 417 aaPredicted RBP6.76□□□□□ -1.33
CD46-215ENST00000488596 CCDC102BQ68D86 513 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 FOXD4L3Q6VB84 417 aaPredicted RBP6.76□□□□□ -1.33
CD46-215ENST00000488596 TPCN2Q8NHX9 752 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 NEUROD4Q9HD90 331 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 HCN4Q9Y3Q4 1203 aa6.76□□□□□ -1.33
CD46-215ENST00000488596 ADARB2-AS1A8MUL3 147 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 SPATA31C1P0DKV0 1188 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 NKAPLQ5M9Q1 402 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 UCN2Q96RP3 112 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
CD46-215ENST00000488596 STARD13Q9Y3M8 1113 aa6.75□□□□□ -1.33
CD46-215ENST00000488596 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 USP17L3A6NCW0 530 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 USP17L4A6NCW7 530 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 M0R082 166 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 USP17L2Q6R6M4 530 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 USP17L1Q7RTZ2 530 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 RAB44Q7Z6P3 723 aaPredicted RBP6.74□□□□□ -1.33
CD46-215ENST00000488596 TRIM50Q86XT4 487 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 PLEKHM2Q8IWE5 1019 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 WWC1Q8IX03 1113 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 RHPN1Q8TCX5 695 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 TNFRSF25Q93038 417 aa6.74□□□□□ -1.33
CD46-215ENST00000488596 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
CD46-215ENST00000488596 GPC6Q9Y625 555 aaPredicted RBP6.74□□□□□ -1.33
CD46-215ENST00000488596 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 PSMA6P60900 246 aaKnown RBP6.73□□□□□ -1.33
CD46-215ENST00000488596 SPEM2Q0P670 501 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 HDGFL1Q5TGJ6 251 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 POTEAQ6S8J7 498 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 ZNF280CQ8ND82 737 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 HSH2DQ96JZ2 352 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 TIMELESSQ9UNS1 1208 aa6.73□□□□□ -1.33
CD46-215ENST00000488596 SFI1A8K8P3 1242 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 DKK1O94907 266 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 ALBP02768 609 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 OGFOD1Q8N543 542 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 CEP63Q96MT8 703 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 PHACTR1Q9C0D0 580 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 BRD7Q9NPI1 651 aa6.72□□□□□ -1.33
CD46-215ENST00000488596 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
CD46-215ENST00000488596 C21orf2O43822 256 aa6.71□□□□□ -1.34
CD46-215ENST00000488596 ATP9BO43861 1147 aa6.71□□□□□ -1.34
CD46-215ENST00000488596 RAD21O60216 631 aa6.71□□□□□ -1.34
CD46-215ENST00000488596 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.34
CD46-215ENST00000488596 TSEN2Q8NCE0 465 aaKnown RBP6.71□□□□□ -1.34
CD46-215ENST00000488596 SUSD3Q96L08 255 aa6.71□□□□□ -1.34
CD46-215ENST00000488596 SPDYE3A6NKU9 549 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 DYRK3O43781 588 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 NID1P14543 1247 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 ADH7P40394 386 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 KCNQ4P56696 695 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 TYRO3Q06418 890 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 C20orf204Q6ZNR8 217 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 LARGE2Q8N3Y3 721 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms