RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 HEG1Q9ULI3 1381 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 TOMM70O94826 608 aa11.47□□□□□ -0.57
PRKCB-208ENST00000487674 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
PRKCB-208ENST00000487674 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
PRKCB-208ENST00000487674 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
PRKCB-208ENST00000487674 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
PRKCB-208ENST00000487674 BCORQ6W2J9 1755 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 A0A087WZG4 1122 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 EIF5P55010 431 aaKnown RBP11.46□□□□□ -0.57
PRKCB-208ENST00000487674 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
PRKCB-208ENST00000487674 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.57
PRKCB-208ENST00000487674 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.57
PRKCB-208ENST00000487674 NMRK2Q9NPI5 230 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 RNF181Q9P0P0 153 aa11.46□□□□□ -0.57
PRKCB-208ENST00000487674 ANKRD31Q8N7Z5 1873 aa11.46□□□□□ -0.58
PRKCB-208ENST00000487674 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
PRKCB-208ENST00000487674 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 ZC3H4Q9UPT8 1303 aaKnown RBP11.45□□□□□ -0.58
PRKCB-208ENST00000487674 SERPINB2P05120 415 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 APLP1P51693 650 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 MAMSTRQ6ZN01 415 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 RSPH6AQ9H0K4 717 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 COL11A2P13942 1736 aaPredicted RBP11.45□□□□□ -0.58
PRKCB-208ENST00000487674 WDR90Q96KV7 1748 aa11.45□□□□□ -0.58
PRKCB-208ENST00000487674 FMNL2Q96PY5 1086 aa11.44□□□□□ -0.58
PRKCB-208ENST00000487674 TIE1P35590 1138 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 IL6STP40189 918 aaPredicted RBP11.43□□□□□ -0.58
PRKCB-208ENST00000487674 RASSF7Q02833 373 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 C2CD5Q86YS7 1000 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
PRKCB-208ENST00000487674 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
PRKCB-208ENST00000487674 PHACTR3Q96KR7 559 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
PRKCB-208ENST00000487674 ARFGEF2Q9Y6D5 1785 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 H0YIN7 160 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 BICDL1Q6ZP65 573 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
PRKCB-208ENST00000487674 ZNF330Q9Y3S2 320 aaPredicted RBP11.42□□□□□ -0.58
PRKCB-208ENST00000487674 LAMB4A4D0S4 1761 aa11.41□□□□□ -0.58
PRKCB-208ENST00000487674 CCDC88AQ3V6T2 1871 aa11.41□□□□□ -0.58
PRKCB-208ENST00000487674 LMNB1P20700 586 aa11.41□□□□□ -0.58
PRKCB-208ENST00000487674 PPP2R1AP30153 589 aa11.41□□□□□ -0.58
PRKCB-208ENST00000487674 FSTL1Q12841 308 aa11.41□□□□□ -0.58
PRKCB-208ENST00000487674 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
PRKCB-208ENST00000487674 FER1L6Q2WGJ9 1857 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 A1BGP04217 495 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
PRKCB-208ENST00000487674 PDE6BP35913 854 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRKCB-208ENST00000487674 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
PRKCB-208ENST00000487674 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
PRKCB-208ENST00000487674 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
PRKCB-208ENST00000487674 NFKBIEO00221 500 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 KCNQ3O43525 872 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 NUBP1P53384 320 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 CNBD1Q8NA66 436 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 SETDB2Q96T68 719 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
PRKCB-208ENST00000487674 HTATSF1O43719 755 aaKnown RBP11.38□□□□□ -0.59
PRKCB-208ENST00000487674 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
PRKCB-208ENST00000487674 PRELPP51888 382 aa11.38□□□□□ -0.59
PRKCB-208ENST00000487674 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-208ENST00000487674 MCM10Q7L590 875 aa11.38□□□□□ -0.59
PRKCB-208ENST00000487674 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
PRKCB-208ENST00000487674 RRAGCQ9HB90 399 aa11.38□□□□□ -0.59
PRKCB-208ENST00000487674 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-208ENST00000487674 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 KDM3BQ7LBC6 1761 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 NPHP1O15259 732 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 ST5P78524 1137 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 DNAJC5GQ8N7S2 189 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 ZNF622Q969S3 477 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRKCB-208ENST00000487674 ZNF652Q9Y2D9 606 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 USP16Q9Y5T5 823 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
PRKCB-208ENST00000487674 LTBP3Q9NS15 1303 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 RGL2O15211 777 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
PRKCB-208ENST00000487674 PCDHB13Q9Y5F0 798 aa11.36□□□□□ -0.59
PRKCB-208ENST00000487674 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms