RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 CYP19A1P11511 503 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-203ENST00000487194 GCKRQ14397 625 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 FAM161AQ3B820 660 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 ANKRD45Q5TZF3 282 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 ZNF772Q68DY9 489 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-203ENST00000487194 KIF6Q6ZMV9 814 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
VAMP3-203ENST00000487194 PALLDQ8WX93 1383 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 LOC102724428A0A0B4J2F2 783 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 NBPF7P0C2Y1 421 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-203ENST00000487194 PDE4AP27815 886 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 ATP6V1AP38606 617 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 IL6STP40189 918 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-203ENST00000487194 PIP4K2AP48426 406 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-203ENST00000487194 SIK1P57059 783 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 MTX1Q13505 466 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 CWF19L2Q2TBE0 894 aaKnown RBP7.65□□□□□ -1.18
VAMP3-203ENST00000487194 HSP90AB4PQ58FF6 505 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 HSP90AB3PQ58FF7 597 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 SKAP1Q86WV1 359 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 SSH3Q8TE77 659 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 SLC4A9Q96Q91 983 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 BACH2Q9BYV9 841 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 LNPKQ9C0E8 428 aa7.65□□□□□ -1.18
VAMP3-203ENST00000487194 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 CICQ96RK0 1608 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-203ENST00000487194 COL15A1P39059 1388 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 MAP3K15Q6ZN16 1313 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 SRGAP3O43295 1099 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 KCNQ2O43526 872 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
VAMP3-203ENST00000487194 POLA2Q14181 598 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 TTLL7Q6ZT98 887 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 PPP1R42Q7Z4L9 355 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 CCDC191Q8NCU4 936 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
VAMP3-203ENST00000487194 CWC25Q9NXE8 425 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-203ENST00000487194 RBM19Q9Y4C8 960 aaKnown RBP7.64□□□□□ -1.19
VAMP3-203ENST00000487194 ZNF831Q5JPB2 1677 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 PNMA6EA0A0J9YXQ4 647 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 ERVV-1B6SEH8 477 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 HMGB2P26583 209 aaKnown RBP7.63□□□□□ -1.19
VAMP3-203ENST00000487194 TCIRG1Q13488 830 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 ZBTB3Q9H5J0 574 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 ZBTB1Q9Y2K1 713 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 ZNF330Q9Y3S2 320 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-203ENST00000487194 TJP1Q07157 1748 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 NUP188Q5SRE5 1749 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 NHSQ6T4R5 1651 aa7.63□□□□□ -1.19
VAMP3-203ENST00000487194 A0A087WZG4 1122 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 H7C1W4 665 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 SURF6O75683 361 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 CRKLP46109 303 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 EIF5P55010 431 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 RBM6P78332 1123 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 INTS5Q6P9B9 1019 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 GIGYF2Q6Y7W6 1299 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 FAM196AQ6ZSG2 479 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 ERC1Q8IUD2 1116 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 SUCLG2Q96I99 432 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 ARXQ96QS3 562 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 ISCA1Q9BUE6 129 aa7.62□□□□□ -1.19
VAMP3-203ENST00000487194 NOP58Q9Y2X3 529 aaKnown RBP7.62□□□□□ -1.19
VAMP3-203ENST00000487194 RGL2O15211 777 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 ITPK1Q13572 414 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 RABL6Q3YEC7 729 aaPredicted RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 C8orf34Q49A92 452 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 BMP2KLQ5H9B9 411 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 UBE3BQ7Z3V4 1068 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 KRT27Q7Z3Y8 459 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 KIF1BPQ96EK5 621 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 KAZALD1Q96I82 304 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 BCL11BQ9C0K0 894 aaPredicted RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 BICC1Q9H694 974 aaKnown RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 EXOC6BQ9Y2D4 811 aa7.61□□□□□ -1.19
VAMP3-203ENST00000487194 AFDNP55196 1824 aaKnown RBP7.61□□□□□ -1.19
VAMP3-203ENST00000487194 RREB1Q92766 1687 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 APBB1O00213 710 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 PCCAP05165 728 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-203ENST00000487194 CASP7P55210 303 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.19
VAMP3-203ENST00000487194 OS9Q13438 667 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-203ENST00000487194 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 ZBTB38Q8NAP3 1195 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-203ENST00000487194 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 CCNL1Q9UK58 526 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-203ENST00000487194 ZNF652Q9Y2D9 606 aa7.6□□□□□ -1.19
VAMP3-203ENST00000487194 BTAF1O14981 1849 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 CDHR2Q9BYE9 1310 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 COL5A3P25940 1745 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-203ENST00000487194 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms