RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 ESPNB1AK53 854 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 ZC3H6P61129 1189 aaKnown RBP14.92□□□□□ -0.02
PTCD2-204ENST00000486995 SUCLG2Q96I99 432 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 ECHDC1Q9NTX5 307 aa14.92□□□□□ -0.02
PTCD2-204ENST00000486995 GRM8O00222 908 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 SIPA1L3O60292 1781 aaPredicted RBP14.91□□□□□ -0.02
PTCD2-204ENST00000486995 ADAMTS7Q9UKP4 1686 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 CCDC173Q0VFZ6 552 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
PTCD2-204ENST00000486995 KIAA1211Q6ZU35 1233 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
PTCD2-204ENST00000486995 TMEM63CQ9P1W3 806 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 MST1RQ04912 1400 aa14.91□□□□□ -0.02
PTCD2-204ENST00000486995 PRIM1P49642 420 aaKnown RBP14.9□□□□□ -0.02
PTCD2-204ENST00000486995 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
PTCD2-204ENST00000486995 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
PTCD2-204ENST00000486995 DDX58O95786 925 aaKnown RBP14.9□□□□□ -0.02
PTCD2-204ENST00000486995 IFIT2P09913 472 aaKnown RBP14.9□□□□□ -0.02
PTCD2-204ENST00000486995 RBSNQ9H1K0 784 aa14.9□□□□□ -0.02
PTCD2-204ENST00000486995 BICC1Q9H694 974 aaKnown RBP14.9□□□□□ -0.02
PTCD2-204ENST00000486995 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
PTCD2-204ENST00000486995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.9□□□□□ -0.02
PTCD2-204ENST00000486995 SASH1O94885 1247 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 IGKV5-2P06315 115 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 AK2P54819 239 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 AACSQ86V21 672 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 SLC52A2Q9HAB3 445 aa14.89□□□□□ -0.03
PTCD2-204ENST00000486995 PTH1RQ03431 593 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 RUFY3Q7L099 469 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 GPATCH3Q96I76 525 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 NPHP3Q7Z494 1330 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 MBD3O95983 291 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 RUFY2Q8WXA3 655 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 RGPD5Q99666 1765 aa14.88□□□□□ -0.03
PTCD2-204ENST00000486995 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
PTCD2-204ENST00000486995 NFATC2IPQ8NCF5 419 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 EAF2Q96CJ1 260 aaPredicted RBP14.87□□□□□ -0.03
PTCD2-204ENST00000486995 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 NLRP2Q9NX02 1062 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 PHKG2P15735 406 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 LRSAM1Q6UWE0 723 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 RIC3Q7Z5B4 369 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 ANP32BQ92688 251 aaKnown RBP14.87□□□□□ -0.03
PTCD2-204ENST00000486995 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
PTCD2-204ENST00000486995 WDR33Q9C0J8 1336 aaKnown RBP14.87□□□□□ -0.03
PTCD2-204ENST00000486995 G3BP1Q13283 466 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTCD2-204ENST00000486995 LARP1Q6PKG0 1096 aaKnown RBP14.86□□□□□ -0.03
PTCD2-204ENST00000486995 KCNB2Q92953 911 aa14.86□□□□□ -0.03
PTCD2-204ENST00000486995 LARP6Q9BRS8 491 aaKnown RBP14.86□□□□□ -0.03
PTCD2-204ENST00000486995 RPAP1Q9BWH6 1393 aaPredicted RBP14.86□□□□□ -0.03
PTCD2-204ENST00000486995 KIF1AQ12756 1690 aa14.86□□□□□ -0.03
PTCD2-204ENST00000486995 SYCE3A1L190 88 aa14.86□□□□□ -0.03
PTCD2-204ENST00000486995 MYL6BP14649 208 aa14.86□□□□□ -0.03
PTCD2-204ENST00000486995 CPA1P15085 419 aa14.86□□□□□ -0.03
PTCD2-204ENST00000486995 NEURL1BA8MQ27 555 aa14.85□□□□□ -0.03
PTCD2-204ENST00000486995 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
PTCD2-204ENST00000486995 CASTP20810 708 aaKnown RBP14.85□□□□□ -0.03
PTCD2-204ENST00000486995 XAGE3Q8WTP9 111 aa14.85□□□□□ -0.03
PTCD2-204ENST00000486995 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
PTCD2-204ENST00000486995 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
PTCD2-204ENST00000486995 ADCK5Q3MIX3 580 aa14.85□□□□□ -0.03
PTCD2-204ENST00000486995 COPS6Q7L5N1 327 aa14.85□□□□□ -0.03
PTCD2-204ENST00000486995 ZNF496Q96IT1 587 aaPredicted RBP14.85□□□□□ -0.03
PTCD2-204ENST00000486995 ALS2Q96Q42 1657 aa14.85□□□□□ -0.03
PTCD2-204ENST00000486995 GCKRQ14397 625 aa14.84□□□□□ -0.03
PTCD2-204ENST00000486995 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
PTCD2-204ENST00000486995 FOXD4L6Q3SYB3 417 aaPredicted RBP14.84□□□□□ -0.03
PTCD2-204ENST00000486995 PRPF40BQ6NWY9 871 aaKnown RBP14.84□□□□□ -0.03
PTCD2-204ENST00000486995 FOXD4L3Q6VB84 417 aaPredicted RBP14.84□□□□□ -0.03
PTCD2-204ENST00000486995 LRP10Q7Z4F1 713 aa14.84□□□□□ -0.03
PTCD2-204ENST00000486995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.84□□□□□ -0.036e-7■■□□□ 12.6
PTCD2-204ENST00000486995 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
PTCD2-204ENST00000486995 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
PTCD2-204ENST00000486995 METTL22Q9BUU2 404 aaPredicted RBP14.84□□□□□ -0.03
PTCD2-204ENST00000486995 GDPD2Q9HCC8 539 aa14.84□□□□□ -0.03
PTCD2-204ENST00000486995 MEGF6O75095 1541 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 GADD45BO75293 160 aaPredicted RBP14.83□□□□□ -0.03
PTCD2-204ENST00000486995 NEXNQ0ZGT2 675 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 USP48Q86UV5 1035 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 KLHDC4Q8TBB5 520 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 TM6SF1Q9BZW5 370 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 SIL1Q9H173 461 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 ZSWIM6Q9HCJ5 1215 aa14.83□□□□□ -0.03
PTCD2-204ENST00000486995 LARGE1O95461 756 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 FAM227BQ96M60 508 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
PTCD2-204ENST00000486995 MYD88Q99836 296 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.83□□□□□ -0.04
PTCD2-204ENST00000486995 USP16Q9Y5T5 823 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 C5P01031 1676 aa14.83□□□□□ -0.04
PTCD2-204ENST00000486995 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms