RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ERC1Q8IUD2 1116 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-207ENST00000486868 SMARCC1Q92922 1105 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-207ENST00000486868 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 MYD88Q99836 296 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 SALL3Q9BXA9 1300 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
PRKCB-207ENST00000486868 TTC22Q5TAA0 569 aa14.38□□□□□ -0.11
PRKCB-207ENST00000486868 CCDC191Q8NCU4 936 aa14.38□□□□□ -0.11
PRKCB-207ENST00000486868 H7C1W4 665 aa14.37□□□□□ -0.11
PRKCB-207ENST00000486868 CYP19A1P11511 503 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-207ENST00000486868 RABL6Q3YEC7 729 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-207ENST00000486868 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
PRKCB-207ENST00000486868 C8orf37Q96NL8 207 aa14.37□□□□□ -0.11
PRKCB-207ENST00000486868 CCDC9Q9Y3X0 531 aaKnown RBP14.37□□□□□ -0.11
PRKCB-207ENST00000486868 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.36□□□□□ -0.11
PRKCB-207ENST00000486868 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
PRKCB-207ENST00000486868 CASP7P55210 303 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 KAZALD1Q96I82 304 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 USP21Q9UK80 565 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
PRKCB-207ENST00000486868 CDC45O75419 566 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
PRKCB-207ENST00000486868 PDE1AP54750 535 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 TCIRG1Q13488 830 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 TTLL7Q6ZT98 887 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
PRKCB-207ENST00000486868 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
PRKCB-207ENST00000486868 CWC25Q9NXE8 425 aaPredicted RBP14.35□□□□□ -0.11
PRKCB-207ENST00000486868 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
PRKCB-207ENST00000486868 RGL2O15211 777 aa14.34□□□□□ -0.11
PRKCB-207ENST00000486868 ONECUT3O60422 494 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-207ENST00000486868 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
PRKCB-207ENST00000486868 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
PRKCB-207ENST00000486868 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
PRKCB-207ENST00000486868 ITGB4P16144 1822 aa14.34□□□□□ -0.11
PRKCB-207ENST00000486868 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.11
PRKCB-207ENST00000486868 A0A087WZG4 1122 aa14.33□□□□□ -0.12
PRKCB-207ENST00000486868 SMARCA5O60264 1052 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-207ENST00000486868 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
PRKCB-207ENST00000486868 C16orf71Q8IYS4 520 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-207ENST00000486868 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
PRKCB-207ENST00000486868 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
PRKCB-207ENST00000486868 MAP3K15Q6ZN16 1313 aa14.33□□□□□ -0.12
PRKCB-207ENST00000486868 SEC24BO95487 1268 aa14.32□□□□□ -0.12
PRKCB-207ENST00000486868 MX1P20591 662 aa14.32□□□□□ -0.12
PRKCB-207ENST00000486868 HSPA1LP34931 641 aa14.32□□□□□ -0.12
PRKCB-207ENST00000486868 PIP4K2AP48426 406 aaPredicted RBP14.32□□□□□ -0.12
PRKCB-207ENST00000486868 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
PRKCB-207ENST00000486868 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
PRKCB-207ENST00000486868 SYTL4Q96C24 671 aaPredicted RBP14.32□□□□□ -0.12
PRKCB-207ENST00000486868 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
PRKCB-207ENST00000486868 LOC102724428A0A0B4J2F2 783 aa14.31□□□□□ -0.12
PRKCB-207ENST00000486868 SIK1P57059 783 aa14.31□□□□□ -0.12
PRKCB-207ENST00000486868 CASC1Q6TDU7 716 aa14.31□□□□□ -0.12
PRKCB-207ENST00000486868 NPM2Q86SE8 214 aaKnown RBP14.31□□□□□ -0.12
PRKCB-207ENST00000486868 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
PRKCB-207ENST00000486868 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-207ENST00000486868 TTC41PQ6P2S7 1318 aa14.31□□□□□ -0.12
PRKCB-207ENST00000486868 ATRNO75882 1429 aa14.31□□□□□ -0.12
PRKCB-207ENST00000486868 PCCAP05165 728 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 RFX5P48382 616 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 EIF5P55010 431 aaKnown RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 TBC1D9Q6ZT07 1266 aa14.3□□□□□ -0.12
PRKCB-207ENST00000486868 OTUD7AQ8TE49 926 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
PRKCB-207ENST00000486868 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-207ENST00000486868 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
PRKCB-207ENST00000486868 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
PRKCB-207ENST00000486868 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 ATP5J2-PTCD1G3V325 749 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 MSH5O43196 834 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 EPB41L2O43491 1005 aaKnown RBP14.29□□□□□ -0.12
PRKCB-207ENST00000486868 SDSP20132 328 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
PRKCB-207ENST00000486868 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 CCDC87Q9NVE4 849 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 CDHR2Q9BYE9 1310 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
PRKCB-207ENST00000486868 APBB1O00213 710 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 FOXO4P98177 505 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
PRKCB-207ENST00000486868 EPHA10Q5JZY3 1008 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
PRKCB-207ENST00000486868 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
PRKCB-207ENST00000486868 AFF2P51816 1311 aa14.27□□□□□ -0.12
PRKCB-207ENST00000486868 ERC2O15083 957 aa14.27□□□□□ -0.13
PRKCB-207ENST00000486868 ATP6V1AP38606 617 aa14.27□□□□□ -0.13
PRKCB-207ENST00000486868 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 419.4 ms