RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	SMARCC1	Q92922	1105 aa	Predicted RBP	11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	MEIS3	Q99687	375 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	C1orf115	Q9H7X2	142 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	ATP10D	Q9P241	1426 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	THSD7A	Q9UPZ6	1657 aa		11.33	□□□□□ -0.6
KIFC1-213	ENST00000486695	UBTFL1	P0CB47	393 aa	Predicted RBP	11.33	□□□□□ -0.6
KIFC1-213	ENST00000486695	BEND3	Q5T5X7	828 aa		11.33	□□□□□ -0.6
KIFC1-213	ENST00000486695	DNAJC10	Q8IXB1	793 aa		11.33	□□□□□ -0.6
KIFC1-213	ENST00000486695	PROM2	Q8N271	834 aa		11.33	□□□□□ -0.6
KIFC1-213	ENST00000486695	HMMR	O75330	724 aa		11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	A1BG	P04217	495 aa		11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	MKRN4P	Q13434	485 aa	Predicted RBP	11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	ANKRD44	Q8N8A2	993 aa		11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	LINS1	Q8NG48	757 aa		11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	GCC1	Q96CN9	775 aa		11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.32	□□□□□ -0.6
KIFC1-213	ENST00000486695	NBPF26	B4DH59	902 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	PIP4K2A	P48426	406 aa	Predicted RBP	11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	PLCB2	Q00722	1185 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	EZH2	Q15910	746 aa	Known RBP	11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	NBPF14	Q5TI25	921 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	NBPF10	Q6P3W6	841 aa	Known RBP	11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	NPM2	Q86SE8	214 aa	Known RBP	11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	SMC5	Q8IY18	1101 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	NBPF15	Q8N660	670 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	PLBD2	Q8NHP8	589 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	METTL22	Q9BUU2	404 aa	Predicted RBP	11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	USP44	Q9H0E7	712 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	PDZRN3	Q9UPQ7	1066 aa		11.31	□□□□□ -0.6
KIFC1-213	ENST00000486695	TNS1	Q9HBL0	1735 aa	Known RBP	11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	R3HDM1	Q15032	1099 aa	Known RBP	11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	CEP85	Q6P2H3	762 aa		11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	FAM196A	Q6ZSG2	479 aa		11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	LRP10	Q7Z4F1	713 aa		11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	MYD88	Q99836	296 aa		11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.3	□□□□□ -0.6
KIFC1-213	ENST00000486695	TRIM37	O94972	964 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	CYP19A1	P11511	503 aa	Predicted RBP	11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	ATP6V1A	P38606	617 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	RGS3	P49796	1198 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	VASP	P50552	380 aa	Predicted RBP	11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	ATP8B2	P98198	1209 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	KIF6	Q6ZMV9	814 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	SIRT2	Q8IXJ6	389 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	CAMKK2	Q96RR4	588 aa		11.29	□□□□□ -0.6
KIFC1-213	ENST00000486695	PALLD	Q8WX93	1383 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	LOC102724428	A0A0B4J2F2	783 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	KCNQ2	O43526	872 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	SIK1	P57059	783 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	SLC4A9	Q96Q91	983 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	DCTPP1	Q9H773	170 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	LRRFIP2	Q9Y608	721 aa	Known RBP	11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	ARFGEF2	Q9Y6D5	1785 aa		11.28	□□□□□ -0.6
KIFC1-213	ENST00000486695	TJP1	Q07157	1748 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	NEURL1B	A8MQ27	555 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	GRM8	O00222	908 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	APBA3	O96018	575 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	NUCB1	Q02818	461 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	CWF19L2	Q2TBE0	894 aa	Known RBP	11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	ANKRD45	Q5TZF3	282 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	TTLL7	Q6ZT98	887 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	ARX	Q96QS3	562 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	NHS	Q6T4R5	1651 aa		11.27	□□□□□ -0.61
KIFC1-213	ENST00000486695	AFDN	P55196	1824 aa	Known RBP	11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	IGKV5-2	P06315	115 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	IL6ST	P40189	918 aa	Predicted RBP	11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	GCKR	Q14397	625 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	CHD1L	Q86WJ1	897 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	ZBTB3	Q9H5J0	574 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	CCDC87	Q9NVE4	849 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	UTY	O14607	1347 aa		11.26	□□□□□ -0.61
KIFC1-213	ENST00000486695	ZNF831	Q5JPB2	1677 aa		11.25	□□□□□ -0.61
KIFC1-213	ENST00000486695	HSP90AB3P	Q58FF7	597 aa		11.25	□□□□□ -0.61
KIFC1-213	ENST00000486695	SKAP1	Q86WV1	359 aa		11.25	□□□□□ -0.61
KIFC1-213	ENST00000486695	TSHZ2	Q9NRE2	1034 aa		11.25	□□□□□ -0.61
KIFC1-213	ENST00000486695	CIC	Q96RK0	1608 aa	Predicted RBP	11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	NUP188	Q5SRE5	1749 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	BTAF1	O14981	1849 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	ATP5J2-PTCD1	G3V325	749 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	TCIRG1	Q13488	830 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	ITPK1	Q13572	414 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	PPP1R42	Q7Z4L9	355 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	CCDC191	Q8NCU4	936 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	CWC25	Q9NXE8	425 aa	Predicted RBP	11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	ZBTB1	Q9Y2K1	713 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	MAP3K15	Q6ZN16	1313 aa		11.24	□□□□□ -0.61
KIFC1-213	ENST00000486695	SBF2	Q86WG5	1849 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695		A0A087WZG4	1122 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	SRGAP3	O43295	1099 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	CRKL	P46109	303 aa	Known RBP	11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	INTS5	Q6P9B9	1019 aa	Known RBP	11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	DZIP3	Q86Y13	1208 aa	Known RBP	11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	SSH3	Q8TE77	659 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	LNPK	Q9C0E8	428 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	RREB1	Q92766	1687 aa		11.23	□□□□□ -0.61
KIFC1-213	ENST00000486695	PNMA6E	A0A0J9YXQ4	647 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms