RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CICQ96RK0 1608 aaPredicted RBP14.71□□□□□ -0.05
PKP4-213ENST00000486254 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.05
PKP4-213ENST00000486254 GCKRQ14397 625 aa14.71□□□□□ -0.05
PKP4-213ENST00000486254 TBC1D2Q9BYX2 928 aa14.71□□□□□ -0.05
PKP4-213ENST00000486254 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.05
PKP4-213ENST00000486254 TTC41PQ6P2S7 1318 aa14.71□□□□□ -0.06
PKP4-213ENST00000486254 CWF19L2Q2TBE0 894 aaKnown RBP14.69□□□□□ -0.06
PKP4-213ENST00000486254 TMOD3Q9NYL9 352 aa14.69□□□□□ -0.06
PKP4-213ENST00000486254 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
PKP4-213ENST00000486254 BCL9O00512 1426 aa14.69□□□□□ -0.06
PKP4-213ENST00000486254 RABL6Q3YEC7 729 aaPredicted RBP14.68□□□□□ -0.06
PKP4-213ENST00000486254 KIF2CQ99661 725 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 TJP1Q07157 1748 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 APBB1O00213 710 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 MYL6BP14649 208 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 IL17RAQ96F46 866 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 KAZALD1Q96I82 304 aa14.68□□□□□ -0.06
PKP4-213ENST00000486254 NBPF26B4DH59 902 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 ERC2O15083 957 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 AIMP1Q12904 312 aaKnown RBP14.67□□□□□ -0.06
PKP4-213ENST00000486254 NBPF14Q5TI25 921 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 NBPF10Q6P3W6 841 aaKnown RBP14.67□□□□□ -0.06
PKP4-213ENST00000486254 HSCBQ8IWL3 235 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 NBPF15Q8N660 670 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 SUCLG2Q96I99 432 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 USP26Q9BXU7 913 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 ANTXR1Q9H6X2 564 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 SLIT2O94813 1529 aa14.67□□□□□ -0.06
PKP4-213ENST00000486254 RABEP1Q15276 862 aa14.66□□□□□ -0.06
PKP4-213ENST00000486254 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
PKP4-213ENST00000486254 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
PKP4-213ENST00000486254 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
PKP4-213ENST00000486254 TOM1O60784 492 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 SLC4A3P48751 1232 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 RTL5Q5HYW3 569 aaPredicted RBP14.65□□□□□ -0.06
PKP4-213ENST00000486254 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 GPATCH3Q96I76 525 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 MYD88Q99836 296 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 COPRSQ9NQ92 184 aa14.65□□□□□ -0.06
PKP4-213ENST00000486254 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
PKP4-213ENST00000486254 CASP7P55210 303 aa14.64□□□□□ -0.07
PKP4-213ENST00000486254 SPATA31A1Q5TZJ5 1347 aa14.64□□□□□ -0.07
PKP4-213ENST00000486254 TRIM28Q13263 835 aaKnown RBP14.64□□□□□ -0.07
PKP4-213ENST00000486254 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
PKP4-213ENST00000486254 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
PKP4-213ENST00000486254 ZNF831Q5JPB2 1677 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 H7C1W4 665 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 EXOC5O00471 708 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 CHMLP26374 656 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 ANAPC15P60006 121 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 PIGBQ92521 554 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 ESYT1Q9BSJ8 1104 aa14.63□□□□□ -0.07
PKP4-213ENST00000486254 STARD3NLO95772 234 aa14.62□□□□□ -0.07
PKP4-213ENST00000486254 OS9Q13438 667 aaPredicted RBP14.62□□□□□ -0.07
PKP4-213ENST00000486254 IL1RAPL2Q9NP60 686 aa14.62□□□□□ -0.07
PKP4-213ENST00000486254 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
PKP4-213ENST00000486254 RREB1Q92766 1687 aa14.62□□□□□ -0.07
PKP4-213ENST00000486254 ANKRD36CQ5JPF3 1778 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.07
PKP4-213ENST00000486254 CNTROBQ8N137 903 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
PKP4-213ENST00000486254 SPATA31A5Q5VU36 1347 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 SPATA31A7Q8IWB4 1347 aa14.61□□□□□ -0.07
PKP4-213ENST00000486254 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
PKP4-213ENST00000486254 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 A0A087WZG4 1122 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 PTCD1O75127 700 aaKnown RBP14.6□□□□□ -0.07
PKP4-213ENST00000486254 DDIT3P35638 169 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 NFKBIBQ15653 356 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 ISCA1Q9BUE6 129 aa14.6□□□□□ -0.07
PKP4-213ENST00000486254 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.59□□□□□ -0.07
PKP4-213ENST00000486254 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 K7ELQ4 463 aaPredicted RBP14.59□□□□□ -0.07
PKP4-213ENST00000486254 SASH1O94885 1247 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 IFIT2P09913 472 aaKnown RBP14.59□□□□□ -0.07
PKP4-213ENST00000486254 MCCP23508 829 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 CHMP5Q9NZZ3 219 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
PKP4-213ENST00000486254 TRIM6-TRIM34B2RNG4 842 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 A1BGP04217 495 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 NBR1Q14596 966 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 PLA2G12BQ9BX93 195 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 ASAP1Q9ULH1 1129 aa14.58□□□□□ -0.08
PKP4-213ENST00000486254 HIP1O00291 1037 aa14.57□□□□□ -0.08
PKP4-213ENST00000486254 PTPN12Q05209 780 aaKnown RBP14.57□□□□□ -0.08
PKP4-213ENST00000486254 TCIRG1Q13488 830 aa14.57□□□□□ -0.08
PKP4-213ENST00000486254 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
PKP4-213ENST00000486254 TSHZ3Q63HK5 1081 aa14.57□□□□□ -0.08
PKP4-213ENST00000486254 GPR108Q9NPR9 543 aa14.57□□□□□ -0.08
PKP4-213ENST00000486254 PA2G4Q9UQ80 394 aaKnown RBP14.57□□□□□ -0.08
PKP4-213ENST00000486254 SGSM2O43147 1006 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 ST18O60284 1047 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 DDB1Q16531 1140 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms