RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
SMARCD3-212ENST00000485610 GNPATO15228 680 aa22.5■■□□□ 1.19
SMARCD3-212ENST00000485610 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
SMARCD3-212ENST00000485610 KIF6Q6ZMV9 814 aa22.5■■□□□ 1.19
SMARCD3-212ENST00000485610 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
SMARCD3-212ENST00000485610 F6X3S4 739 aa22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 DNAAF4Q8WXU2 420 aa22.49■■□□□ 1.19
SMARCD3-212ENST00000485610 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 A0A087WZG4 1122 aa22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 EZH2Q15910 746 aaKnown RBP22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 RIC3Q7Z5B4 369 aa22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 MAP3K2Q9Y2U5 619 aa22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 RTCBQ9Y3I0 505 aaKnown RBP22.48■■□□□ 1.19
SMARCD3-212ENST00000485610 MAP3K15Q6ZN16 1313 aa22.47■■□□□ 1.19
SMARCD3-212ENST00000485610 DEFB132Q7Z7B7 95 aa22.47■■□□□ 1.19
SMARCD3-212ENST00000485610 TMEM57Q8N5G2 664 aa22.47■■□□□ 1.19
SMARCD3-212ENST00000485610 SLC4A10Q6U841 1118 aa22.47■■□□□ 1.19
SMARCD3-212ENST00000485610 DZIP3Q86Y13 1208 aaKnown RBP22.47■■□□□ 1.19
SMARCD3-212ENST00000485610 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-212ENST00000485610 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-212ENST00000485610 INTS3Q68E01 1043 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-212ENST00000485610 ZBTB3Q9H5J0 574 aa22.46■■□□□ 1.19
SMARCD3-212ENST00000485610 COG6Q9Y2V7 657 aa22.46■■□□□ 1.19
SMARCD3-212ENST00000485610 ADRA2BP18089 450 aa22.45■■□□□ 1.18
SMARCD3-212ENST00000485610 ITPRIPQ8IWB1 547 aa22.45■■□□□ 1.18
SMARCD3-212ENST00000485610 ARXQ96QS3 562 aa22.45■■□□□ 1.18
SMARCD3-212ENST00000485610 CRBNQ96SW2 442 aa22.45■■□□□ 1.18
SMARCD3-212ENST00000485610 AKT1S1Q96B36 256 aa22.44■■□□□ 1.18
SMARCD3-212ENST00000485610 METTL22Q9BUU2 404 aaPredicted RBP22.44■■□□□ 1.18
SMARCD3-212ENST00000485610 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
SMARCD3-212ENST00000485610 SSFA2P28290 1259 aa22.43■■□□□ 1.18
SMARCD3-212ENST00000485610 NEXNQ0ZGT2 675 aa22.43■■□□□ 1.18
SMARCD3-212ENST00000485610 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMARCD3-212ENST00000485610 TBC1D2BQ9UPU7 963 aa22.43■■□□□ 1.18
SMARCD3-212ENST00000485610 FKBP8Q14318 412 aa22.42■■□□□ 1.18
SMARCD3-212ENST00000485610 ZNF827Q17R98 1081 aa22.42■■□□□ 1.18
SMARCD3-212ENST00000485610 SRCIN1Q9C0H9 1055 aa22.42■■□□□ 1.18
SMARCD3-212ENST00000485610 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
SMARCD3-212ENST00000485610 CAMTA2O94983 1202 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 BEND3Q5T5X7 828 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 AMIGO3Q86WK7 504 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 RGL2O15211 777 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 PHF14O94880 888 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 LINS1Q8NG48 757 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 MYD88Q99836 296 aa22.41■■□□□ 1.18
SMARCD3-212ENST00000485610 IBTKQ9P2D0 1353 aaPredicted RBP22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 HSP90AB3PQ58FF7 597 aa22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 TRAPPC3LQ5T215 181 aa22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 EXOC6Q8TAG9 804 aa22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 NARFQ9UHQ1 456 aa22.4■■□□□ 1.18
SMARCD3-212ENST00000485610 ALDH1L1O75891 902 aa22.39■■□□□ 1.17
SMARCD3-212ENST00000485610 ARHGEF1Q92888 912 aaKnown RBP22.39■■□□□ 1.17
SMARCD3-212ENST00000485610 TFCP2L1Q9NZI6 479 aa22.39■■□□□ 1.17
SMARCD3-212ENST00000485610 ZNF652Q9Y2D9 606 aa22.39■■□□□ 1.17
SMARCD3-212ENST00000485610 COL24A1Q17RW2 1714 aa22.39■■□□□ 1.17
SMARCD3-212ENST00000485610 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 SMIM5Q71RC9 77 aa22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 CHMP4BQ9H444 224 aaKnown RBP22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 ANO8Q9HCE9 1232 aaPredicted RBP22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 STK32BQ9NY57 414 aa22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 USP42Q9H9J4 1324 aaKnown RBP22.38■■□□□ 1.17
SMARCD3-212ENST00000485610 ZPR1O75312 459 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 RFC4P35249 363 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 HLFQ16534 295 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 FLAD1Q8NFF5 587 aa22.37■■□□□ 1.17
SMARCD3-212ENST00000485610 NEURL1BA8MQ27 555 aa22.36■■□□□ 1.17
SMARCD3-212ENST00000485610 CWF19L2Q2TBE0 894 aaKnown RBP22.36■■□□□ 1.17
SMARCD3-212ENST00000485610 CLEC4GQ6UXB4 293 aa22.36■■□□□ 1.17
SMARCD3-212ENST00000485610 AAMPQ13685 434 aa22.35■■□□□ 1.17
SMARCD3-212ENST00000485610 SLC15A2Q16348 729 aa22.35■■□□□ 1.17
SMARCD3-212ENST00000485610 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
SMARCD3-212ENST00000485610 USPL1Q5W0Q7 1092 aa22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 ATP5J2-PTCD1G3V325 749 aa22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 ZBTB7BO15156 539 aaPredicted RBP22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 TRIM28Q13263 835 aaKnown RBP22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 CCDC191Q8NCU4 936 aa22.34■■□□□ 1.17
SMARCD3-212ENST00000485610 PNPLA7Q6ZV29 1317 aa22.33■■□□□ 1.17
SMARCD3-212ENST00000485610 MYH3P11055 1940 aa22.33■■□□□ 1.16
SMARCD3-212ENST00000485610 LAMB2P55268 1798 aa22.33■■□□□ 1.16
SMARCD3-212ENST00000485610 GCKRQ14397 625 aa22.33■■□□□ 1.16
SMARCD3-212ENST00000485610 MEIS3Q99687 375 aa22.33■■□□□ 1.16
SMARCD3-212ENST00000485610 CWC25Q9NXE8 425 aaPredicted RBP22.33■■□□□ 1.16
SMARCD3-212ENST00000485610 GNAI3P08754 354 aa22.32■■□□□ 1.16
SMARCD3-212ENST00000485610 ZNF34Q8IZ26 560 aa22.32■■□□□ 1.16
SMARCD3-212ENST00000485610 BCL2L12Q9HB09 334 aa22.32■■□□□ 1.16
SMARCD3-212ENST00000485610 ZBTB40Q9NUA8 1239 aa22.32■■□□□ 1.16
SMARCD3-212ENST00000485610 GPTP24298 496 aa22.31■■□□□ 1.16
SMARCD3-212ENST00000485610 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
SMARCD3-212ENST00000485610 GTF3C3Q9Y5Q9 886 aa22.31■■□□□ 1.16
SMARCD3-212ENST00000485610 GRM8O00222 908 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms