RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 FMNL2Q96PY5 1086 aa17.66■□□□□ 0.42
UBA3-210ENST00000485424 RSPH6AQ9H0K4 717 aa17.66■□□□□ 0.42
UBA3-210ENST00000485424 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
UBA3-210ENST00000485424 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
UBA3-210ENST00000485424 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
UBA3-210ENST00000485424 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
UBA3-210ENST00000485424 GLTPD2A6NH11 291 aa17.64■□□□□ 0.41
UBA3-210ENST00000485424 A1BGP04217 495 aa17.64■□□□□ 0.41
UBA3-210ENST00000485424 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
UBA3-210ENST00000485424 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
UBA3-210ENST00000485424 KCNQ3O43525 872 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
UBA3-210ENST00000485424 NPHP1O15259 732 aa17.62■□□□□ 0.41
UBA3-210ENST00000485424 PDE6BP35913 854 aa17.62■□□□□ 0.41
UBA3-210ENST00000485424 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.414e-6■□□□□ 8.2
UBA3-210ENST00000485424 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
UBA3-210ENST00000485424 LAMB2P55268 1798 aa17.61■□□□□ 0.41
UBA3-210ENST00000485424 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
UBA3-210ENST00000485424 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
UBA3-210ENST00000485424 CNBD1Q8NA66 436 aa17.61■□□□□ 0.41
UBA3-210ENST00000485424 C21orf2O43822 256 aa17.6■□□□□ 0.41
UBA3-210ENST00000485424 SETDB2Q96T68 719 aa17.6■□□□□ 0.41
UBA3-210ENST00000485424 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
UBA3-210ENST00000485424 ADAMTSL1Q8N6G6 1762 aa17.59■□□□□ 0.41
UBA3-210ENST00000485424 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
UBA3-210ENST00000485424 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
UBA3-210ENST00000485424 MCM10Q7L590 875 aa17.59■□□□□ 0.41
UBA3-210ENST00000485424 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
UBA3-210ENST00000485424 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.4
UBA3-210ENST00000485424 POTECB2RU33 542 aa17.58■□□□□ 0.4
UBA3-210ENST00000485424 ST5P78524 1137 aa17.58■□□□□ 0.4
UBA3-210ENST00000485424 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
UBA3-210ENST00000485424 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
UBA3-210ENST00000485424 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
UBA3-210ENST00000485424 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
UBA3-210ENST00000485424 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
UBA3-210ENST00000485424 SRGNP10124 158 aa17.56■□□□□ 0.4
UBA3-210ENST00000485424 ERFEQ4G0M1 354 aa17.56■□□□□ 0.4
UBA3-210ENST00000485424 STYK1Q6J9G0 422 aa17.56■□□□□ 0.4
UBA3-210ENST00000485424 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
UBA3-210ENST00000485424 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
UBA3-210ENST00000485424 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
UBA3-210ENST00000485424 CNKSR1Q969H4 720 aa17.55■□□□□ 0.4
UBA3-210ENST00000485424 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
UBA3-210ENST00000485424 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
UBA3-210ENST00000485424 CLEC4GQ6UXB4 293 aa17.54■□□□□ 0.4
UBA3-210ENST00000485424 MASTLQ96GX5 879 aa17.54■□□□□ 0.4
UBA3-210ENST00000485424 ZNF652Q9Y2D9 606 aa17.54■□□□□ 0.4
UBA3-210ENST00000485424 TAF1P21675 1872 aa17.53■□□□□ 0.4
UBA3-210ENST00000485424 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
UBA3-210ENST00000485424 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
UBA3-210ENST00000485424 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
UBA3-210ENST00000485424 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
UBA3-210ENST00000485424 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
UBA3-210ENST00000485424 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
UBA3-210ENST00000485424 COL13A1Q5TAT6 717 aaPredicted RBP17.51■□□□□ 0.39
UBA3-210ENST00000485424 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
UBA3-210ENST00000485424 ABCB7O75027 752 aa17.5■□□□□ 0.39
UBA3-210ENST00000485424 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
UBA3-210ENST00000485424 RGL2O15211 777 aa17.49■□□□□ 0.39
UBA3-210ENST00000485424 DDNO94850 711 aaPredicted RBP17.49■□□□□ 0.39
UBA3-210ENST00000485424 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
UBA3-210ENST00000485424 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBA3-210ENST00000485424 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
UBA3-210ENST00000485424 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 NPR1P16066 1061 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 COL4A5P29400 1685 aa17.48■□□□□ 0.39
UBA3-210ENST00000485424 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 HLFQ16534 295 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
UBA3-210ENST00000485424 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
UBA3-210ENST00000485424 KCNA4P22459 653 aa17.46■□□□□ 0.39
UBA3-210ENST00000485424 GTF2E1P29083 439 aaPredicted RBP17.46■□□□□ 0.39
UBA3-210ENST00000485424 RALBP1Q15311 655 aa17.46■□□□□ 0.39
UBA3-210ENST00000485424 OLFM4Q6UX06 510 aa17.46■□□□□ 0.39
UBA3-210ENST00000485424 DDX60Q8IY21 1712 aaKnown RBP17.46■□□□□ 0.39
UBA3-210ENST00000485424 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
UBA3-210ENST00000485424 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
UBA3-210ENST00000485424 HSPA1AP0DMV8 641 aaKnown RBP17.45■□□□□ 0.38
UBA3-210ENST00000485424 HSPA1BP0DMV9 641 aaKnown RBP17.45■□□□□ 0.38
UBA3-210ENST00000485424 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBA3-210ENST00000485424 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
UBA3-210ENST00000485424 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
UBA3-210ENST00000485424 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
UBA3-210ENST00000485424 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
UBA3-210ENST00000485424 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
UBA3-210ENST00000485424 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
UBA3-210ENST00000485424 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
UBA3-210ENST00000485424 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
UBA3-210ENST00000485424 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms