RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RGPD4Q7Z3J3 1758 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 DDX58O95786 925 aaKnown RBP18.4■□□□□ 0.54
LRIF1-202ENST00000485275 IGKV5-2P06315 115 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
LRIF1-202ENST00000485275 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
LRIF1-202ENST00000485275 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
LRIF1-202ENST00000485275 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 PROM2Q8N271 834 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
LRIF1-202ENST00000485275 ANKRD36CQ5JPF3 1778 aa18.39■□□□□ 0.53
LRIF1-202ENST00000485275 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.53
LRIF1-202ENST00000485275 PLBD2Q8NHP8 589 aa18.39■□□□□ 0.53
LRIF1-202ENST00000485275 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
LRIF1-202ENST00000485275 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
LRIF1-202ENST00000485275 NUP98P52948 1817 aa18.38■□□□□ 0.53
LRIF1-202ENST00000485275 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
LRIF1-202ENST00000485275 METTL22Q9BUU2 404 aaPredicted RBP18.37■□□□□ 0.53
LRIF1-202ENST00000485275 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 SCN7AQ01118 1682 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 COL15A1P39059 1388 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 MYD88Q99836 296 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 USP44Q9H0E7 712 aa18.37■□□□□ 0.53
LRIF1-202ENST00000485275 APBA3O96018 575 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 HLFQ16534 295 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 TXNRD1Q16881 649 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 PLSCR1O15162 318 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
LRIF1-202ENST00000485275 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
LRIF1-202ENST00000485275 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
LRIF1-202ENST00000485275 IGHDP01880 384 aa18.34■□□□□ 0.53
LRIF1-202ENST00000485275 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
LRIF1-202ENST00000485275 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
LRIF1-202ENST00000485275 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
LRIF1-202ENST00000485275 AAMPQ13685 434 aa18.33■□□□□ 0.53
LRIF1-202ENST00000485275 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.53
LRIF1-202ENST00000485275 GNPATO15228 680 aa18.32■□□□□ 0.52
LRIF1-202ENST00000485275 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
LRIF1-202ENST00000485275 CAMTA2O94983 1202 aa18.32■□□□□ 0.52
LRIF1-202ENST00000485275 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
LRIF1-202ENST00000485275 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
LRIF1-202ENST00000485275 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
LRIF1-202ENST00000485275 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
LRIF1-202ENST00000485275 GCKRQ14397 625 aa18.31■□□□□ 0.52
LRIF1-202ENST00000485275 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
LRIF1-202ENST00000485275 ARXQ96QS3 562 aa18.31■□□□□ 0.52
LRIF1-202ENST00000485275 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
LRIF1-202ENST00000485275 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
LRIF1-202ENST00000485275 UTYO14607 1347 aa18.3■□□□□ 0.52
LRIF1-202ENST00000485275 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
LRIF1-202ENST00000485275 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
LRIF1-202ENST00000485275 ERVV-1B6SEH8 477 aa18.29■□□□□ 0.52
LRIF1-202ENST00000485275 GRM8O00222 908 aa18.29■□□□□ 0.52
LRIF1-202ENST00000485275 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
LRIF1-202ENST00000485275 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
LRIF1-202ENST00000485275 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
LRIF1-202ENST00000485275 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
LRIF1-202ENST00000485275 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
LRIF1-202ENST00000485275 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
LRIF1-202ENST00000485275 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
LRIF1-202ENST00000485275 GNAI3P08754 354 aa18.27■□□□□ 0.52
LRIF1-202ENST00000485275 CASP7P55210 303 aa18.27■□□□□ 0.52
LRIF1-202ENST00000485275 AK7Q96M32 723 aa18.27■□□□□ 0.52
LRIF1-202ENST00000485275 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
LRIF1-202ENST00000485275 PHF14O94880 888 aa18.27■□□□□ 0.51
LRIF1-202ENST00000485275 GNAI2P04899 355 aa18.27■□□□□ 0.51
LRIF1-202ENST00000485275 GPTP24298 496 aa18.27■□□□□ 0.51
LRIF1-202ENST00000485275 EN1Q05925 392 aaPredicted RBP18.27■□□□□ 0.51
LRIF1-202ENST00000485275 EZH2Q15910 746 aaKnown RBP18.27■□□□□ 0.51
LRIF1-202ENST00000485275 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.51
LRIF1-202ENST00000485275 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.51
LRIF1-202ENST00000485275 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.51
LRIF1-202ENST00000485275 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
LRIF1-202ENST00000485275 ARHGEF1Q92888 912 aaKnown RBP18.26■□□□□ 0.51
LRIF1-202ENST00000485275 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
LRIF1-202ENST00000485275 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
LRIF1-202ENST00000485275 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
LRIF1-202ENST00000485275 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 CWC25Q9NXE8 425 aaPredicted RBP18.25■□□□□ 0.51
LRIF1-202ENST00000485275 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
LRIF1-202ENST00000485275 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
LRIF1-202ENST00000485275 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
LRIF1-202ENST00000485275 A0A087WZG4 1122 aa18.24■□□□□ 0.51
LRIF1-202ENST00000485275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
LRIF1-202ENST00000485275 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms