RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
SORT1-206ENST00000485149 TGFB2P61812 414 aa8.67□□□□□ -1.02
SORT1-206ENST00000485149 PKD1L3Q7Z443 1732 aa8.67□□□□□ -1.02
SORT1-206ENST00000485149 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
SORT1-206ENST00000485149 KTN1Q86UP2 1357 aaKnown RBP8.67□□□□□ -1.02
SORT1-206ENST00000485149 KIAA1551Q9HCM1 1747 aa8.67□□□□□ -1.02
SORT1-206ENST00000485149 KIF13BQ9NQT8 1826 aa8.67□□□□□ -1.02
SORT1-206ENST00000485149 PALLDQ8WX93 1383 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
SORT1-206ENST00000485149 PHF14O94880 888 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 IRF5Q13568 498 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
SORT1-206ENST00000485149 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 MON2Q7Z3U7 1717 aa8.66□□□□□ -1.02
SORT1-206ENST00000485149 FAM205CA6NFA0 338 aa8.65□□□□□ -1.02
SORT1-206ENST00000485149 NUDT7P0C024 238 aa8.65□□□□□ -1.02
SORT1-206ENST00000485149 SSFA2P28290 1259 aa8.65□□□□□ -1.02
SORT1-206ENST00000485149 AMIGO3Q86WK7 504 aa8.65□□□□□ -1.02
SORT1-206ENST00000485149 RRAGCQ9HB90 399 aa8.65□□□□□ -1.02
SORT1-206ENST00000485149 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
SORT1-206ENST00000485149 N4BP2Q86UW6 1770 aaPredicted RBP8.65□□□□□ -1.02
SORT1-206ENST00000485149 FCHSD2O94868 740 aa8.64□□□□□ -1.03
SORT1-206ENST00000485149 IP6K1Q92551 441 aa8.64□□□□□ -1.03
SORT1-206ENST00000485149 CCDC97Q96F63 343 aaPredicted RBP8.64□□□□□ -1.03
SORT1-206ENST00000485149 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
SORT1-206ENST00000485149 MEGF6O75095 1541 aa8.64□□□□□ -1.03
SORT1-206ENST00000485149 A0A0G2JLW4 131 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 MMP10P09238 476 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 MLLT1Q03111 559 aaPredicted RBP8.63□□□□□ -1.03
SORT1-206ENST00000485149 PDE4DQ08499 809 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 E2F4Q16254 413 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
SORT1-206ENST00000485149 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
SORT1-206ENST00000485149 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.03
SORT1-206ENST00000485149 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
SORT1-206ENST00000485149 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 PRDM10Q9NQV6 1147 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 RNF181Q9P0P0 153 aa8.63□□□□□ -1.03
SORT1-206ENST00000485149 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
SORT1-206ENST00000485149 CGNL1Q0VF96 1302 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 ZC3H4Q9UPT8 1303 aaKnown RBP8.62□□□□□ -1.03
SORT1-206ENST00000485149 ARFGEF1Q9Y6D6 1849 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
SORT1-206ENST00000485149 SMIM5Q71RC9 77 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 NME9Q86XW9 330 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 ZNF687Q8N1G0 1237 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
SORT1-206ENST00000485149 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
SORT1-206ENST00000485149 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
SORT1-206ENST00000485149 DPEP1P16444 411 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 LHX6Q9UPM6 363 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
SORT1-206ENST00000485149 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 TRIM66O15016 1216 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 FOXN1O15353 648 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
SORT1-206ENST00000485149 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 NLGN1Q8N2Q7 840 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
SORT1-206ENST00000485149 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 GNPATO15228 680 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 PPM1GO15355 546 aaPredicted RBP8.59□□□□□ -1.03
SORT1-206ENST00000485149 EVI5O60447 810 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 KCNA3P22001 575 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 PBX2P40425 430 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 CTCFP49711 727 aaPredicted RBP8.59□□□□□ -1.03
SORT1-206ENST00000485149 LINC00116Q8NCU8 138 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 C4AP0C0L4 1744 aa8.59□□□□□ -1.03
SORT1-206ENST00000485149 CD163L1Q9NR16 1453 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 EDC4Q6P2E9 1401 aaKnown RBP8.58□□□□□ -1.04
SORT1-206ENST00000485149 GLTPD2A6NH11 291 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 HOXC9P31274 260 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 TMF1P82094 1093 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
SORT1-206ENST00000485149 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 RAPGEF4Q8WZA2 1011 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 ABHD8Q96I13 439 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 RGPD2P0DJD1 1756 aa8.58□□□□□ -1.04
SORT1-206ENST00000485149 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
SORT1-206ENST00000485149 LOC102724428A0A0B4J2F2 783 aa8.57□□□□□ -1.04
SORT1-206ENST00000485149 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
SORT1-206ENST00000485149 SIK1P57059 783 aa8.57□□□□□ -1.04
SORT1-206ENST00000485149 HDGFL2Q7Z4V5 671 aaPredicted RBP8.57□□□□□ -1.04
SORT1-206ENST00000485149 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
SORT1-206ENST00000485149 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
SORT1-206ENST00000485149 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
SORT1-206ENST00000485149 ITGB4P16144 1822 aa8.57□□□□□ -1.04
SORT1-206ENST00000485149 MAP3K19Q56UN5 1328 aa8.56□□□□□ -1.04
SORT1-206ENST00000485149 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
SORT1-206ENST00000485149 SBF1O95248 1867 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms