RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 NFKBIEO00221 500 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 ST5P78524 1137 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 RASSF7Q02833 373 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
TMEM40-208ENST00000485124 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 SMC1BQ8NDV3 1235 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 RRAGCQ9HB90 399 aa13.13□□□□□ -0.31
TMEM40-208ENST00000485124 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
TMEM40-208ENST00000485124 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
TMEM40-208ENST00000485124 ANP32CO43423 234 aa13.12□□□□□ -0.31
TMEM40-208ENST00000485124 KCNQ3O43525 872 aa13.12□□□□□ -0.31
TMEM40-208ENST00000485124 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
TMEM40-208ENST00000485124 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
TMEM40-208ENST00000485124 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
TMEM40-208ENST00000485124 PCNTO95613 3336 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 NEFMP07197 916 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 SRGNP10124 158 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 PRELPP51888 382 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
TMEM40-208ENST00000485124 MCM10Q7L590 875 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
TMEM40-208ENST00000485124 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM40-208ENST00000485124 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
TMEM40-208ENST00000485124 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
TMEM40-208ENST00000485124 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
TMEM40-208ENST00000485124 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
TMEM40-208ENST00000485124 NPHP1O15259 732 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 C21orf2O43822 256 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 JMYQ8N9B5 988 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 NUP98P52948 1817 aa13.09□□□□□ -0.31
TMEM40-208ENST00000485124 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
TMEM40-208ENST00000485124 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
TMEM40-208ENST00000485124 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
TMEM40-208ENST00000485124 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
TMEM40-208ENST00000485124 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
TMEM40-208ENST00000485124 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
TMEM40-208ENST00000485124 SCN4AP35499 1836 aa13.08□□□□□ -0.32
TMEM40-208ENST00000485124 RIC1Q4ADV7 1423 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
TMEM40-208ENST00000485124 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
TMEM40-208ENST00000485124 NPR1P16066 1061 aa13.06□□□□□ -0.32
TMEM40-208ENST00000485124 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM40-208ENST00000485124 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
TMEM40-208ENST00000485124 POTECB2RU33 542 aa13.05□□□□□ -0.32
TMEM40-208ENST00000485124 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
TMEM40-208ENST00000485124 CCDC93Q567U6 631 aa13.05□□□□□ -0.32
TMEM40-208ENST00000485124 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
TMEM40-208ENST00000485124 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
TMEM40-208ENST00000485124 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
TMEM40-208ENST00000485124 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
TMEM40-208ENST00000485124 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
TMEM40-208ENST00000485124 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
TMEM40-208ENST00000485124 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMEM40-208ENST00000485124 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
TMEM40-208ENST00000485124 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
TMEM40-208ENST00000485124 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
TMEM40-208ENST00000485124 BABAM1Q9NWV8 329 aa13.03□□□□□ -0.32
TMEM40-208ENST00000485124 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
TMEM40-208ENST00000485124 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
TMEM40-208ENST00000485124 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.33
TMEM40-208ENST00000485124 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
TMEM40-208ENST00000485124 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
TMEM40-208ENST00000485124 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
TMEM40-208ENST00000485124 RALBP1Q15311 655 aa13.01□□□□□ -0.33
TMEM40-208ENST00000485124 HLFQ16534 295 aa13.01□□□□□ -0.33
TMEM40-208ENST00000485124 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
TMEM40-208ENST00000485124 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
TMEM40-208ENST00000485124 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
TMEM40-208ENST00000485124 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
TMEM40-208ENST00000485124 HTRA3P83110 453 aa13□□□□□ -0.33
TMEM40-208ENST00000485124 CHADLQ6NUI6 762 aa13□□□□□ -0.33
TMEM40-208ENST00000485124 PSMD1Q99460 953 aa13□□□□□ -0.33
TMEM40-208ENST00000485124 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
TMEM40-208ENST00000485124 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
TMEM40-208ENST00000485124 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
TMEM40-208ENST00000485124 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
TMEM40-208ENST00000485124 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
TMEM40-208ENST00000485124 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 RNF123Q5XPI4 1314 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
TMEM40-208ENST00000485124 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
TMEM40-208ENST00000485124 FZD9O00144 591 aa12.97□□□□□ -0.33
TMEM40-208ENST00000485124 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
TMEM40-208ENST00000485124 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
TMEM40-208ENST00000485124 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
TMEM40-208ENST00000485124 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
TMEM40-208ENST00000485124 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
TMEM40-208ENST00000485124 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms