RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 ERLIN2O94905 339 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 MATR3P43243 847 aaKnown RBP eCLIP18.58■□□□□ 0.57
PCDH17-202ENST00000484979 TMEM266Q2M3C6 531 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 SPC24Q8NBT2 197 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 ZFYP08048 801 aaPredicted RBP18.58■□□□□ 0.56
PCDH17-202ENST00000484979 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.56
PCDH17-202ENST00000484979 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.56
PCDH17-202ENST00000484979 FLT4P35916 1363 aa18.58■□□□□ 0.56
PCDH17-202ENST00000484979 MAP3K11Q16584 847 aa18.58■□□□□ 0.56
PCDH17-202ENST00000484979 NUP160Q12769 1436 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 KIF20AO95235 890 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 KSR2Q6VAB6 950 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
PCDH17-202ENST00000484979 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 KCNA6P17658 529 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 NLRP5P59047 1200 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 GSTO1P78417 241 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 ZGPATQ8N5A5 531 aaKnown RBP18.56■□□□□ 0.56
PCDH17-202ENST00000484979 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 RHPN1Q8TCX5 695 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
PCDH17-202ENST00000484979 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
PCDH17-202ENST00000484979 DNAI2Q9GZS0 605 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 PAXIP1Q6ZW49 1069 aaPredicted RBP18.56■□□□□ 0.56
PCDH17-202ENST00000484979 OGFOD1Q8N543 542 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
PCDH17-202ENST00000484979 GRM8O00222 908 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 TRAF1Q13077 416 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 SCLT1Q96NL6 688 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
PCDH17-202ENST00000484979 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
PCDH17-202ENST00000484979 MFSD6Q6ZSS7 791 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
PCDH17-202ENST00000484979 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 CCDC181Q5TID7 509 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
PCDH17-202ENST00000484979 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCDH17-202ENST00000484979 IL15P40933 162 aaPredicted RBP18.54■□□□□ 0.56
PCDH17-202ENST00000484979 ZNF771Q7L3S4 317 aaPredicted RBP18.54■□□□□ 0.56
PCDH17-202ENST00000484979 FILIP1Q7Z7B0 1213 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 TMEM67Q5HYA8 995 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
PCDH17-202ENST00000484979 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 PPP4R3BQ5MIZ7 849 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 NYXQ9GZU5 481 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 SEPT11Q9NVA2 429 aaKnown RBP18.53■□□□□ 0.56
PCDH17-202ENST00000484979 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
PCDH17-202ENST00000484979 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
PCDH17-202ENST00000484979 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.56
PCDH17-202ENST00000484979 STX8Q9UNK0 236 aa18.52■□□□□ 0.56
PCDH17-202ENST00000484979 CETN2P41208 172 aa18.52■□□□□ 0.55
PCDH17-202ENST00000484979 ZC3H12CQ9C0D7 883 aaKnown RBP18.52■□□□□ 0.55
PCDH17-202ENST00000484979 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 FGFR1OPO95684 399 aaKnown RBP18.51■□□□□ 0.55
PCDH17-202ENST00000484979 ANO10Q9NW15 660 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 JARID2Q92833 1246 aaPredicted RBP18.51■□□□□ 0.55
PCDH17-202ENST00000484979 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 NBPF14Q5TI25 921 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
PCDH17-202ENST00000484979 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 MEIS3Q99687 375 aa18.51■□□□□ 0.55
PCDH17-202ENST00000484979 PATL2C9JE40 543 aaKnown RBP18.51■□□□□ 0.55
PCDH17-202ENST00000484979 EPB41L2O43491 1005 aaKnown RBP18.51■□□□□ 0.55
PCDH17-202ENST00000484979 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 TMTC2Q8N394 836 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 SIRT1Q96EB6 747 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 TSG101Q99816 390 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 ORC3Q9UBD5 711 aaPredicted RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 NPATQ14207 1427 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 NEFHP12036 1026 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 CHMP4BP1P59074 171 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 GUCY1B3Q02153 619 aa18.5■□□□□ 0.55
PCDH17-202ENST00000484979 MTERF4Q7Z6M4 381 aaKnown RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 UTP14AQ9BVJ6 771 aaKnown RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 NBPF7P0C2Y1 421 aaPredicted RBP18.5■□□□□ 0.55
PCDH17-202ENST00000484979 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
PCDH17-202ENST00000484979 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
PCDH17-202ENST00000484979 HAND2P61296 217 aa18.49■□□□□ 0.55
PCDH17-202ENST00000484979 TFCP2L1Q9NZI6 479 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms