RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 A1BGP04217 495 aa14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 IL6STP40189 918 aaPredicted RBP14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 C7orf43Q8WVR3 580 aa14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 SETDB2Q96T68 719 aa14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
SMARCC1-205ENST00000483847 NPHP1O15259 732 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 SOGA3Q5TF21 947 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 ZNF790Q6PG37 636 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 OLFM4Q6UX06 510 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 IL17REQ8NFR9 667 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 MASTLQ96GX5 879 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 TIMELESSQ9UNS1 1208 aa14.77□□□□□ -0.05
SMARCC1-205ENST00000483847 HSPA8P11142 646 aaKnown RBP14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 ST5P78524 1137 aa14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 ABHD8Q96I13 439 aa14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 ZNF277Q9NRM2 450 aaPredicted RBP14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
SMARCC1-205ENST00000483847 RASSF10A6NK89 507 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 EPHX2P34913 555 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 TEFQ10587 303 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 CCDC93Q567U6 631 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 MAP1SQ66K74 1059 aaPredicted RBP14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 HACL1Q9UJ83 578 aa14.75□□□□□ -0.05
SMARCC1-205ENST00000483847 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 KCNQ3O43525 872 aa14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 DIAPH1O60610 1272 aaKnown RBP14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 DEFB115Q30KQ5 88 aa14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 DZIP3Q86Y13 1208 aaKnown RBP14.74□□□□□ -0.05
SMARCC1-205ENST00000483847 NBPF5PQ86XG9 351 aaPredicted RBP14.73□□□□□ -0.05
SMARCC1-205ENST00000483847 CNTROBQ8N137 903 aa14.73□□□□□ -0.05
SMARCC1-205ENST00000483847 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
SMARCC1-205ENST00000483847 WDR33Q9C0J8 1336 aaKnown RBP14.72□□□□□ -0.05
SMARCC1-205ENST00000483847 GNAT3A8MTJ3 354 aa14.72□□□□□ -0.05
SMARCC1-205ENST00000483847 NPR1P16066 1061 aa14.72□□□□□ -0.05
SMARCC1-205ENST00000483847 COL3A1P02461 1466 aaPredicted RBP14.71□□□□□ -0.05
SMARCC1-205ENST00000483847 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
SMARCC1-205ENST00000483847 KLRG2A4D1S0 409 aaPredicted RBP14.71□□□□□ -0.05
SMARCC1-205ENST00000483847 FMR1Q06787 632 aaKnown RBP eCLIP14.71□□□□□ -0.058e-8■□□□□ 10.5
SMARCC1-205ENST00000483847 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
SMARCC1-205ENST00000483847 USP16Q9Y5T5 823 aa14.71□□□□□ -0.05
SMARCC1-205ENST00000483847 COL4A5P29400 1685 aa14.71□□□□□ -0.06
SMARCC1-205ENST00000483847 THSD7BQ9C0I4 1608 aa14.7□□□□□ -0.06
SMARCC1-205ENST00000483847 LTBP1Q14766 1721 aa14.7□□□□□ -0.06
SMARCC1-205ENST00000483847 FZD9O00144 591 aa14.7□□□□□ -0.06
SMARCC1-205ENST00000483847 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
SMARCC1-205ENST00000483847 ABT1Q9ULW3 272 aaKnown RBP14.7□□□□□ -0.06
SMARCC1-205ENST00000483847 SNED1Q8TER0 1413 aa14.69□□□□□ -0.06
SMARCC1-205ENST00000483847 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
SMARCC1-205ENST00000483847 MAP2K1Q02750 393 aaPredicted RBP14.69□□□□□ -0.06
SMARCC1-205ENST00000483847 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
SMARCC1-205ENST00000483847 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
SMARCC1-205ENST00000483847 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 BTBD11A6QL63 1104 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 CLEC4GQ6UXB4 293 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 RTKN2Q8IZC4 609 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 GPC2Q8N158 579 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 DDX21Q9NR30 783 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMARCC1-205ENST00000483847 CCDC85CA6NKD9 419 aa14.67□□□□□ -0.06
SMARCC1-205ENST00000483847 TPTE2Q6XPS3 522 aa14.67□□□□□ -0.06
SMARCC1-205ENST00000483847 CAPNS2Q96L46 248 aa14.67□□□□□ -0.06
SMARCC1-205ENST00000483847 NIP7Q9Y221 180 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMARCC1-205ENST00000483847 NBPF26B4DH59 902 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 GRM1Q13255 1194 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 CYP4F22Q6NT55 531 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 NBPF10Q6P3W6 841 aaKnown RBP14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 SLC51AQ86UW1 340 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 NBPF15Q8N660 670 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 PHACTR3Q96KR7 559 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 GJA3Q9Y6H8 435 aa14.66□□□□□ -0.06
SMARCC1-205ENST00000483847 TRAF5O00463 557 aa14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 PER1O15534 1290 aaPredicted RBP14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 MLLT1Q03111 559 aaPredicted RBP14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 PAXIP1Q6ZW49 1069 aaPredicted RBP14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 KIF7Q2M1P5 1343 aa14.65□□□□□ -0.06
SMARCC1-205ENST00000483847 ABCC12Q96J65 1359 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 ALDH1B1P30837 517 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 EPS15P42566 896 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 RGS19P49795 217 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 SCNN1DP51172 638 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 HLFQ16534 295 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 CST9Q5W186 159 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 PSMD1Q99460 953 aa14.64□□□□□ -0.07
SMARCC1-205ENST00000483847 TNRC18O15417 2968 aaPredicted RBP14.63□□□□□ -0.07
SMARCC1-205ENST00000483847 CNGB1Q14028 1251 aaPredicted RBP14.63□□□□□ -0.07
SMARCC1-205ENST00000483847 TRPM7Q96QT4 1865 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms