RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
LRRFIP1-212ENST00000483443 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
LRRFIP1-212ENST00000483443 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
LRRFIP1-212ENST00000483443 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
LRRFIP1-212ENST00000483443 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
LRRFIP1-212ENST00000483443 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
LRRFIP1-212ENST00000483443 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
LRRFIP1-212ENST00000483443 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
LRRFIP1-212ENST00000483443 A1BGP04217 495 aa17.19■□□□□ 0.34
LRRFIP1-212ENST00000483443 STYK1Q6J9G0 422 aa17.19■□□□□ 0.34
LRRFIP1-212ENST00000483443 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
LRRFIP1-212ENST00000483443 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
LRRFIP1-212ENST00000483443 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
LRRFIP1-212ENST00000483443 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
LRRFIP1-212ENST00000483443 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
LRRFIP1-212ENST00000483443 NBPF5PQ86XG9 351 aaPredicted RBP17.17■□□□□ 0.34
LRRFIP1-212ENST00000483443 MASTLQ96GX5 879 aa17.17■□□□□ 0.34
LRRFIP1-212ENST00000483443 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 SRGNP10124 158 aa17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
LRRFIP1-212ENST00000483443 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
LRRFIP1-212ENST00000483443 KCNQ3O43525 872 aa17.14■□□□□ 0.33
LRRFIP1-212ENST00000483443 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
LRRFIP1-212ENST00000483443 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
LRRFIP1-212ENST00000483443 PCNTO95613 3336 aa17.14■□□□□ 0.33
LRRFIP1-212ENST00000483443 IQCA1LA6NCM1 817 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 POTECB2RU33 542 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 RGL2O15211 777 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 NEFMP07197 916 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 MCM10Q7L590 875 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 TNS4Q8IZW8 715 aa17.13■□□□□ 0.33
LRRFIP1-212ENST00000483443 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 NPR1P16066 1061 aa17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
LRRFIP1-212ENST00000483443 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-212ENST00000483443 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-212ENST00000483443 NIP7Q9Y221 180 aaKnown RBP eCLIP17.11■□□□□ 0.33
LRRFIP1-212ENST00000483443 DICER1Q9UPY3 1922 aaKnown RBP17.1■□□□□ 0.33
LRRFIP1-212ENST00000483443 CREBZFQ9NS37 354 aa17.1■□□□□ 0.33
LRRFIP1-212ENST00000483443 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
LRRFIP1-212ENST00000483443 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
LRRFIP1-212ENST00000483443 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
LRRFIP1-212ENST00000483443 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
LRRFIP1-212ENST00000483443 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
LRRFIP1-212ENST00000483443 SLX4Q8IY92 1834 aa17.08■□□□□ 0.33
LRRFIP1-212ENST00000483443 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
LRRFIP1-212ENST00000483443 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
LRRFIP1-212ENST00000483443 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 L3MBTL3Q96JM7 780 aaPredicted RBP17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
LRRFIP1-212ENST00000483443 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
LRRFIP1-212ENST00000483443 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
LRRFIP1-212ENST00000483443 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 POTEJP0CG39 1038 aa17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
LRRFIP1-212ENST00000483443 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
LRRFIP1-212ENST00000483443 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
LRRFIP1-212ENST00000483443 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
LRRFIP1-212ENST00000483443 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 HLFQ16534 295 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 PNMA8AQ86V59 439 aaPredicted RBP17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
LRRFIP1-212ENST00000483443 SCN4AP35499 1836 aa17.02■□□□□ 0.31
LRRFIP1-212ENST00000483443 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
LRRFIP1-212ENST00000483443 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
LRRFIP1-212ENST00000483443 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
LRRFIP1-212ENST00000483443 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
LRRFIP1-212ENST00000483443 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
LRRFIP1-212ENST00000483443 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
LRRFIP1-212ENST00000483443 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 PASKQ96RG2 1323 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 TMEM88BA6NKF7 163 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 EPHX2P34913 555 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 SYNE4Q8N205 404 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 AIDAQ96BJ3 306 aa17■□□□□ 0.31
LRRFIP1-212ENST00000483443 PSMD1Q99460 953 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms