RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 GLMNQ92990 594 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 STRN4Q9NRL3 753 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 ZNF232Q9UNY5 417 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 ARAFP10398 606 aa7.03□□□□□ -1.28
LAPTM4A-202ENST00000483117 AMPD1P23109 780 aa7.03□□□□□ -1.28
LAPTM4A-202ENST00000483117 ZNF594Q96JF6 807 aaPredicted RBP7.03□□□□□ -1.28
LAPTM4A-202ENST00000483117 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
LAPTM4A-202ENST00000483117 KLF15Q9UIH9 416 aa7.03□□□□□ -1.28
LAPTM4A-202ENST00000483117 EML1O00423 815 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 FAM157BP0CG42 384 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 EPXP11678 715 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 HOXB4P17483 251 aaPredicted RBP7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 FAM182BQ5T319 152 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 LRRC69Q6ZNQ3 347 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 MKL2Q9ULH7 1088 aa7.02□□□□□ -1.29
LAPTM4A-202ENST00000483117 SERTM1A2A2V5 107 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 SFI1A8K8P3 1242 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 SAMD5Q5TGI4 173 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 LARGE2Q8N3Y3 721 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 TSEN2Q8NCE0 465 aaKnown RBP7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 C7orf43Q8WVR3 580 aa7.01□□□□□ -1.29
LAPTM4A-202ENST00000483117 PALM3A6NDB9 673 aaPredicted RBP7□□□□□ -1.29
LAPTM4A-202ENST00000483117 EFSO43281 561 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 DKK1O94907 266 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 COL8A1P27658 744 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 BAG6P46379 1132 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 PCBP4P57723 403 aaKnown RBP7□□□□□ -1.29
LAPTM4A-202ENST00000483117 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 MARK1Q9P0L2 795 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
LAPTM4A-202ENST00000483117 RASA1P20936 1047 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 ADH6P28332 368 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 PSMA6P60900 246 aaKnown RBP6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 SIX5Q8N196 739 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 NEUROD4Q9HD90 331 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 PRR12Q9ULL5 1215 aa6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 MAFBQ9Y5Q3 323 aaPredicted RBP6.99□□□□□ -1.29
LAPTM4A-202ENST00000483117 KRBA1A5PL33 1030 aa6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 M0R2N6 131 aa6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 FURINP09958 794 aa6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 ZNF468Q5VIY5 522 aaPredicted RBP6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 CHSY3Q70JA7 882 aa6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 HSH2DQ96JZ2 352 aa6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 AVENQ9NQS1 362 aaPredicted RBP6.98□□□□□ -1.29
LAPTM4A-202ENST00000483117 C21orf2O43822 256 aa6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 DGKGP49619 791 aa6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 SFSWAPQ12872 951 aaKnown RBP6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 CALR3Q96L12 384 aaKnown RBP6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 CHMP3Q9Y3E7 222 aa6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
LAPTM4A-202ENST00000483117 A6NJR5 290 aa6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 PPP1R12BO60237 982 aaPredicted RBP6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 LGR5O75473 907 aa6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 POTEAQ6S8J7 498 aa6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
LAPTM4A-202ENST00000483117 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 GNB5O14775 395 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 HIRAP54198 1017 aaPredicted RBP6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 CRTC2Q53ET0 693 aaPredicted RBP6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 C1orf53Q5VUE5 145 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 SYT9Q86SS6 491 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 ZNF280CQ8ND82 737 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 SCG3Q8WXD2 468 aaKnown RBP6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
LAPTM4A-202ENST00000483117 SEC13P55735 322 aa6.94□□□□□ -1.3
LAPTM4A-202ENST00000483117 KANK4Q5T7N3 995 aaPredicted RBP6.94□□□□□ -1.3
LAPTM4A-202ENST00000483117 LARP1Q6PKG0 1096 aaKnown RBP6.94□□□□□ -1.3
LAPTM4A-202ENST00000483117 GAS2L2Q8NHY3 880 aa6.94□□□□□ -1.3
LAPTM4A-202ENST00000483117 CHMP7Q8WUX9 453 aaPredicted RBP6.94□□□□□ -1.3
LAPTM4A-202ENST00000483117 LMOD1P29536 600 aaPredicted RBP6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 DPYDQ12882 1025 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 PTK7Q13308 1070 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 RAB44Q7Z6P3 723 aaPredicted RBP6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 ALDH16A1Q8IZ83 802 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 NGLY1Q96IV0 654 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 C2orf49Q9BVC5 232 aaPredicted RBP6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 BRD7Q9NPI1 651 aa6.93□□□□□ -1.3
LAPTM4A-202ENST00000483117 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
LAPTM4A-202ENST00000483117 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
LAPTM4A-202ENST00000483117 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 ELOA3DA6NLF2 546 aaPredicted RBP6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L15C9J2P7 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L13C9JLJ4 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L11C9JVI0 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L21D6R901 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L18D6R9N7 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L22D6RA61 530 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms